Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3249 ATGGCTACTCCGCAAGCTTTCCACTCTTCTTCTTTTCCTTCCTTCAGGGACAGCGAGTGGGAATTCGATGTGTTCCTCAGCTTCAGAGGCCCTGAAACTCGCTACGGTTTCACTGGCTATCTCCACAAAGCATTTTGTGAGAAGGGAATCCGTACCTTCATGGATCTTGAGGATCTTATCAGTGGCAATAAAATCCAACAAACATTTGCTAGAGCAATTGAAAGCTCCAGGATTGCCATTATTGTGTTCTCGGAGCATTATGCTGACACCGATTTCTTGTTGAGGGAACTTGTCAAGCTCTTGGAGTGCTCTCAACGCTGTGGCCAGTTTATTTTGCCGATTTTCTATTTGGTGGATCCCGGCGACGTGCGGCATCAGAGAGGTAGTTATGAGAAAGCAATGGCGGTGCACGAGGAGCGGTTCAAGGATAAAGCGCCAATTTGGAGAGCCGCTCTGCGTGACGCAGCCAACTTCTCCGGCTTGCATTACAAAGGGGATGAATTTGAATACGAATTTATTGAGAGGATCGCTAAACAGGTGTTGGCGATCATTAAAGAGGACAGCGTACCTGTTGTTGCTGATTATCCAGTCAGAGCAGAGTCTCATGTGAAAGCGTTGTCATCGTTTTCTTTCCCAAGGCAATACCAATACCATGTGTTTCTCAGCTTCAGAGGCTGTGATACTCGCTATTGTTTCACTGGCAGTCTCTTCAAAGCTCTCCGCGACAACAAAATCCACACCTTCATGGATGATGTAGGCCTTCACAGAGGGAATGATATATCAAGAACACTTATTCAGGCAATTCAAGGCTCCAGGATTGCCATCATTGTGTTCTCTGAGAACTATGCTGATTCTACTTACTGCTTAGATGAACTTGTCAAGATCTTAGAGTGCCAAGAGTCTGATGGCCAGTTCATTTTGCCCGTTTTCTATGATGTATATCATAGTGACGTCCGACGACAGACAGGTAGTTTTGGGGCAGCAATAGCTAAACATGAGGAGAAGTTCAAGGACGACCTGTCGAAAGTCGAAAAATGGAAGCGGGCTTTGCATCGAGCAGCTAATTTTACTGGCTTTGTTTTCGATGGGAAAAAATATGAACACGAGTTAATTGGGAAGATTGTTGAAGTGGTGTCAAGGGAGATTAAACGAGTTGCTTTACACGTTGCTGACTATCCAATTGGACTAGAGTCTCAAGTTTCAGAAGTAAAATCGCTTATATTCTCTGATGGCTATGATGGAGTCCACATGGTAGGGATTCATGGAAATGGTGGATCAGGCAAAACAACAATAGCTCATGCAATTTATAATTTGATTGCTAACGGTTTTGAAAGTATATGTTTTCTTGAAAATGTGAGAGAAAATTCATATAAGCATGGCTTAGTGTATCTTCAAAATATGCTTCTTTCTAATGTATTCGAAAGGAAGAATCTCAAATCAACAAGTTTTGATCAAGGAATTTCAACAATAAAGCACTGGCTCCAACAAAAGAGGATCCTTTTGATTCTAGATGATGTTGACAAACCAGAGCAATTACAAGCTCTTGCTGGAAAACCTGATTGGTTTGGCCGTGGAACTAGAGTCATTGTTACGACAAGGGACAAATATTTACTAGAGAGCCATGGGATTGAAAGAATCTATGAGATGGAGAACTCAAATTCGGAATCAAATATCTCTACTGCATCAGATGGAAAAGACAACGGAGATCAACTGGGTGAAAAAAATCATTTTCCAAGAACAAGTCAATGA 1749 0.4231 MATPQAFHSSSFPSFRDSEWEFDVFLSFRGPETRYGFTGYLHKAFCEKGIRTFMDLEDLISGNKIQQTFARAIESSRIAIIVFSEHYADTDFLLRELVKLLECSQRCGQFILPIFYLVDPGDVRHQRGSYEKAMAVHEERFKDKAPIWRAALRDAANFSGLHYKGDEFEYEFIERIAKQVLAIIKEDSVPVVADYPVRAESHVKALSSFSFPRQYQYHVFLSFRGCDTRYCFTGSLFKALRDNKIHTFMDDVGLHRGNDISRTLIQAIQGSRIAIIVFSENYADSTYCLDELVKILECQESDGQFILPVFYDVYHSDVRRQTGSFGAAIAKHEEKFKDDLSKVEKWKRALHRAANFTGFVFDGKKYEHELIGKIVEVVSREIKRVALHVADYPIGLESQVSEVKSLIFSDGYDGVHMVGIHGNGGSGKTTIAHAIYNLIANGFESICFLENVRENSYKHGLVYLQNMLLSNVFERKNLKSTSFDQGISTIKHWLQQKRILLILDDVDKPEQLQALAGKPDWFGRGTRVIVTTRDKYLLESHGIERIYEMENSNSESNISTASDGKDNGDQLGEKNHFPRTSQ* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3249 582 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 220 555 - -
Ahy15g3249 582 CDD AAA 394 532 - -
Ahy15g3249 582 MobiDBLite consensus disorder prediction 549 566 - -
Ahy15g3249 582 SUPERFAMILY Toll/Interleukin receptor TIR domain 210 359 IPR035897 -
Ahy15g3249 582 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 388 555 IPR027417 -
Ahy15g3249 582 PRINTS Disease resistance protein signature 417 432 - -
Ahy15g3249 582 PRINTS Disease resistance protein signature 493 507 - -
Ahy15g3249 582 ProSiteProfiles TIR domain profile. 20 184 IPR000157 GO:0007165
Ahy15g3249 582 ProSiteProfiles TIR domain profile. 215 382 IPR000157 GO:0007165
Ahy15g3249 582 Gene3D - 388 546 IPR027417 -
Ahy15g3249 582 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 220 555 IPR044974 GO:0006952
Ahy15g3249 582 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 211 IPR044974 GO:0006952
Ahy15g3249 582 MobiDBLite consensus disorder prediction 549 582 - -
Ahy15g3249 582 SMART till_3 21 158 IPR000157 GO:0007165
Ahy15g3249 582 SMART till_3 216 356 IPR000157 GO:0007165
Ahy15g3249 582 Pfam NB-ARC domain 399 543 IPR002182 GO:0043531
Ahy15g3249 582 Pfam TIR domain 216 380 IPR000157 GO:0007165
Ahy15g3249 582 Pfam TIR domain 22 180 IPR000157 GO:0007165
Ahy15g3249 582 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 24 211 - -
Ahy15g3249 582 Gene3D - 211 387 IPR035897 -
Ahy15g3249 582 Gene3D - 16 191 IPR035897 -
Ahy15g3249 582 SUPERFAMILY Toll/Interleukin receptor TIR domain 11 160 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3249 Ahy-Chr15 154597415 154600281 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3249 265 550 WRKY Transcription Factor Family AT4G12020 31.250 3.31e-25 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3249 - - ahf:112751549 1162.13