Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3240 ATGGATTTGTGCTGTGCTGAAATCCAATTCAAGTTGGTTTCAAAAACTGAGGAAATGGATTTGAGCTCTAAATCCTACAAATGGAAGTATGATGTATTCTTGAGCTTTAGAGGGGATGATACACGTAGGAGTTTCACAAGCCATCTTTATCATGCTCTTTGCCAAAAGGGTGTCAATACTTTCATAGACTACAAGGATCTCATAAAGGGAGAGCAGATAACACCTTCACTTCTTAGGGCTATTGAAGCCTCAAGGATCTCAGTCGTTGTATTATCTGAAAACTATGCATCTTCCACTTCTTGCTTGGATGAACTCCTTAAGATCATTGAGTGCAAGGACACTAAGGGTCAGCTGGTTTTGCCGGTCTTTTATGGTGTGAATCCATCTCAAGTAAGAGAACAGAAGGGAAGTTTTGCAGAAGATTTGGCCAAACATGAAGACAAGTTCAGGGATGATGTCAACAAAGTAAAAAGGTGGAGGGCAGCACTATGTGAGGCTTCTACTTTGTCTGGGTGGCACATGGGTGACGGGCAAGAATCAAAATTTGTCCAGAGAATTGTTGAGGAGATATTGAGCAAGTTGAACCGCACACCTTTCAATGTTGCTAAGCATCCTGTTGGATTGGATTCACCTATTGAAGATATTAAAACACTTTTAGATACTGGATCAGATGATGTACAGGCTATAGGAATTTATGGAATTGGAGGTATAGGGAAAACAACACTTGCTAAGGCTGTTTATAACCATATTGCTAACCAGTTTGAGGGTAGCGCCTTCATTGCAAATGTTAGAGAAATTTCAAGTCAAAGATCTGGGTTAGTTCAACTACAAGAAGCTCTTCTTTCTGAGATTTTGAACCATAGATATTGTAAAGTAGGAAACAAAGACAGAGGCATTAATATGATAAAGAATAGGCTTTGCAGCAAAAAAGTTCTCATAGTTGTTGATGATGCTGATTCGTTGGATCAACTGGAATCATTGATTGGAGAATATAGTTGGTTTGGTTCTGGAAGTAGAATCATCATAACAACTAGAGATGAGCATTTGCTAGTTGCTCACAATGTGGAAACAATCTACAAGGTCAACGAATTAAATAATGGTCATGCTCTTGAACTTTTTAGTTGGTTTGCGTTCAAAAATCCATGTCCTCCAACAAATTATGAGAAGCTTTCATCCCACATATTAAACTATGCCAAGGGCCTCCCATTGGCTCTAACAGTTTTGGGATCTCACCTGTGTGGTAGGGGAAAAGCTGAGTGGATAAGTGCATTAGCTAAACTGAAAAAAGTTCCAAACAAACAGATTTTTGAAATACTTAAAATCAGCTTTCATGGATTGGAAGAGAATGAAAAGGCTATTTTTCTTGATATTGCATGTTTCTTTAAGGGAGAGGACAGACAATATGTGAAAATGATATTAGATGGTTGTGACCTACATTCGGATAATGGTTTCGGAGTTCTATTGGAGAAGTCTCTAATTACAATAGAAGTTAATAAGATTTGGATGCATGATTTGCTACAGGAAATGGCTAAAGAAATTGTGCGACGTGAATCCCCTAGTGATCCTGGTAAACGTAGCAGATTATGGTTTAATGAGGATGTTCTTCATGTATTAAAACACAATAAGGGAAGTAACAACATTGAAGGCATAAGGCTAGATATACCAGAATCAGAGACAGAGTACATAGAGGCCAAGGCCTTGTCAAGGATGAATAGACTCAGAATTCTTATTATCAACAATATGCATGTTACAGATGATATCCAGTATCTACCTGATAATCTAAGATTGATTAATTGGCCAAGATACCCCTCTTCAACTCTACCACCAAATTTCTATCCAAGGAGGCTTGTCTGTCTAAATATGAGTCATAGCCGCCTCAAGCACTTGTGGAAGGGAGTTAAGATATTCAGAGACTTGAAACTTGTGTCCTTTAGCAGCTGTGAACACCTTAAAGAAATTCCAGACTTCTCAATGGTTCCAAACCTAGAAAGCCTAAGCCTAGACAACTGTAGAAGTTTAATTAAGGTGCATGAGTCTGTGGGAACTCTTGATAAGCTTGTTACTTTAAACCTTCTATTTTGCTCCAATCTCAAGACGTTTCCAAGTCGTTTCATGCTAAAATCACTCCGTACTCTCCTCCTCACTGGCTGCTCAAAACTAAAAAAGTTTCCGGAGATTGTGGGGAACATGGAACATCTTGAAGAAATCCTTCTCCAAGGAACAGCAATAAAAGAACTACCTCAGTCGATTGAATATCTAAGTGGGCTGAAGTCCTTATTCTTAGAGTCTTGCCAAAGTCTTGAGCATCTCCCCAGTAGCCTTCAGAAGTTGCAAAACCTTACCATTCTTGATCTAAGTGGCTGCTCTAAGCTTCAAAAGATTCCAAAGCTTCCCCTAAATACAAGATATATAGACTTGAGTAATTGTAGATCTTTGACAAGCTTTCCAACATTATCCAGCATATCAAATTTTATTGCAGAGGATTTTCCAAGGTTTTATCAAATTAGATTTGTTAACTGCCATAAACTGGTAAATAAACAAGTCCTGGAGCACATAACAAATCTCTTCTGTAGTAAGGATATGATGCTTCCAGAATATATTTCTTGTGAAGTTGTACTTCCAGGGAGCAAGATCCCAGATTGGTTCCAATACCAGAGTACTAATAATTCCATTTATCTTGAGGTATCTTCAGGTTTATATGGTAAGCCCATGGAGGTGTTTTTTGGCGCAGTTTTTGAGTTGGATAAAGGTGTTACTACAACTGGCCTGTTTGCAAGTAAATTTGATGTTATTGTCAATGATATAAAGATAAATATGTCTACAAGCTATTTTGAGGCACTGGACTCAAGTCATGTGTGGTTGAGTCGGTTGAAACTTGATCATTTTATGTGGCACCTTAAAAGTATGCGTCAATGGAATCACTTTCAGATTTCATTTTCAATCTTTGAAACATCATCAAAGGAGAAGATAGGGGCAACCTTGAAGAGTTGTGGTTTCCATGTTTGGTACAATCAAGAAGGGTATGGGATTGATCATACAACAGTTAGGAAGTCCACAGGGTAA 3063 0.3823 MDLCCAEIQFKLVSKTEEMDLSSKSYKWKYDVFLSFRGDDTRRSFTSHLYHALCQKGVNTFIDYKDLIKGEQITPSLLRAIEASRISVVVLSENYASSTSCLDELLKIIECKDTKGQLVLPVFYGVNPSQVREQKGSFAEDLAKHEDKFRDDVNKVKRWRAALCEASTLSGWHMGDGQESKFVQRIVEEILSKLNRTPFNVAKHPVGLDSPIEDIKTLLDTGSDDVQAIGIYGIGGIGKTTLAKAVYNHIANQFEGSAFIANVREISSQRSGLVQLQEALLSEILNHRYCKVGNKDRGINMIKNRLCSKKVLIVVDDADSLDQLESLIGEYSWFGSGSRIIITTRDEHLLVAHNVETIYKVNELNNGHALELFSWFAFKNPCPPTNYEKLSSHILNYAKGLPLALTVLGSHLCGRGKAEWISALAKLKKVPNKQIFEILKISFHGLEENEKAIFLDIACFFKGEDRQYVKMILDGCDLHSDNGFGVLLEKSLITIEVNKIWMHDLLQEMAKEIVRRESPSDPGKRSRLWFNEDVLHVLKHNKGSNNIEGIRLDIPESETEYIEAKALSRMNRLRILIINNMHVTDDIQYLPDNLRLINWPRYPSSTLPPNFYPRRLVCLNMSHSRLKHLWKGVKIFRDLKLVSFSSCEHLKEIPDFSMVPNLESLSLDNCRSLIKVHESVGTLDKLVTLNLLFCSNLKTFPSRFMLKSLRTLLLTGCSKLKKFPEIVGNMEHLEEILLQGTAIKELPQSIEYLSGLKSLFLESCQSLEHLPSSLQKLQNLTILDLSGCSKLQKIPKLPLNTRYIDLSNCRSLTSFPTLSSISNFIAEDFPRFYQIRFVNCHKLVNKQVLEHITNLFCSKDMMLPEYISCEVVLPGSKIPDWFQYQSTNNSIYLEVSSGLYGKPMEVFFGAVFELDKGVTTTGLFASKFDVIVNDIKINMSTSYFEALDSSHVWLSRLKLDHFMWHLKSMRQWNHFQISFSIFETSSKEKIGATLKSCGFHVWYNQEGYGIDHTTVRKSTG* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3240 1020 Pfam C-JID domain 873 1006 IPR045344 -
Ahy15g3240 1020 Gene3D - 363 447 IPR042197 -
Ahy15g3240 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 716 IPR044974 GO:0006952
Ahy15g3240 1020 Gene3D Ribonuclease Inhibitor 705 858 IPR032675 -
Ahy15g3240 1020 ProSiteProfiles TIR domain profile. 28 194 IPR000157 GO:0007165
Ahy15g3240 1020 SUPERFAMILY L domain-like 501 843 - -
Ahy15g3240 1020 Pfam NB-ARC domain 211 431 IPR002182 GO:0043531
Ahy15g3240 1020 Pfam TIR domain 29 198 IPR000157 GO:0007165
Ahy15g3240 1020 Gene3D - 26 192 IPR035897 -
Ahy15g3240 1020 SMART AAA_5 225 368 IPR003593 -
Ahy15g3240 1020 SMART till_3 29 169 IPR000157 GO:0007165
Ahy15g3240 1020 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 457 IPR027417 -
Ahy15g3240 1020 Gene3D - 193 359 IPR027417 -
Ahy15g3240 1020 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 172 IPR035897 -
Ahy15g3240 1020 Gene3D Ribonuclease Inhibitor 541 704 IPR032675 -
Ahy15g3240 1020 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 28 716 - -
Ahy15g3240 1020 PRINTS Disease resistance protein signature 398 412 - -
Ahy15g3240 1020 PRINTS Disease resistance protein signature 305 319 - -
Ahy15g3240 1020 PRINTS Disease resistance protein signature 775 791 - -
Ahy15g3240 1020 PRINTS Disease resistance protein signature 228 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3240 Ahy-Chr15 154445550 154450206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3240 16 828 WRKY Transcription Factor Family AT4G12020 32.749 1.44e-115 390