Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3208 ATGCTCAGGAGTCAGGACCCTCAACATGTACAAAGTAGTCTCGAAAAACTGGCCGTAGATCGAATCCATTTTCTCCTTCGAATCAACCGCCAACGTCCGTACGCAGGCGGTTACTTCCTTGGCGTGAAGCTTGGCGACGATGTGAGGACAATGCTATCGGACTTCGAATCGGCGATTCAGAAGGAACCGTGCAAGACAACGGCTCCCGGCGGTGGAGTACACCTGATCACGCGCTACGTGTTGAACTACATCTCTCTCTTAGCCGATTACAGTAGTGTCCTCATTGACATAATCGCCGATTATCCATTGTCTCCGTTTCCAGAATATTTCTACCGAAGCCTAATCCACGAGGATAGCACGTCATTGTCCTTGATGTTCAGGAGTCTTGGTACTTCCTCTATGGGAGGATATATATATTTTTTTACTGTAATAGAAGACAAAAGTAAATTTATATAG 456 0.4605 MLRSQDPQHVQSSLEKLAVDRIHFLLRINRQRPYAGGYFLGVKLGDDVRTMLSDFESAIQKEPCKTTAPGGGVHLITRYVLNYISLLADYSSVLIDIIADYPLSPFPEYFYRSLIHEDSTSLSLMFRSLGTSSMGGYIYFFTVIEDKSKFI* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3208 151 SUPERFAMILY Cullin repeat-like 43 115 IPR016159 -
Ahy15g3208 151 PANTHER EXOCYST COMPLEX PROTEIN EXO70 42 110 IPR004140 GO:0000145|GO:0006887
Ahy15g3208 151 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 42 110 - -
Ahy15g3208 151 Pfam Exo70 exocyst complex subunit 43 104 IPR046364 GO:0000145|GO:0005546|GO:0006887
Ahy15g3208 151 Gene3D Exocyst complex component Exo70 39 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3208 Ahy-Chr15 154130628 154131211 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3208 42 113 EXO70 exocyst subunit family AT5G59730 53.333 8.95e-19 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3208 K07195 - ahf:112747255 303.138