Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3183 ATGTCACCCAAGTTGGATAGCTTATCCAAGATGTCGATCACCTTAAAAGTTTTGAATTTTGATTACAGTGATTCTTTGAAAGAGATACTTGATGTGTCTAATCTTCAAAATGTAGAAGAATTTTCTTTTGAAGGATGTAGTAATTTAGTCTCAGTTCACAGTTCAGTTGGTTTTTTACCTAAACTTAAAATATTGAATGCTAAAAGGTGCCCCAAGCTCAGAAGTTTTCCTCCGGATATTAATTTGACCTCACTGGAAACACTCGGTCTATCTGGATGCTCAAGCCTTGAGAAATTTCCAGAAATTCCAGAAAAGATGGAAAATCTAGAAGTGCTTGATTTGAGTGACAATGGCATAAAAGATTTGCCATGTTCATTTTGTAACCTTTCTAGATTGCAGCGTTTGTATTTGAGGGTTAATGAAATGTATAGAATACCAAGTGTCATTGGCATGATGCCACGCCTGTATGCGTGTGATATTGAGTTAAGAGGAAATAAGGGGAGGGTATCAGGAGAGCAGGAAGAGGGGCTTCATGGAATACTCACTCACTCCCTTCCCTCTTCACATTTGGAAAATCTTTATGTCAGAAACAGCAATTTGTCATATGACTTTTTTCCCGTAGCTGTTGCATGGTTTCCCAATCTGAAAGTGTTATATCTAAGAGGCAGTAATTTCACAGTCCTTCCTGAATGCATCCAACAGTTTCGCTTTCTTTATGCTCTCGATGTGGATGATTGCGAGCATCTTCGGGAGATTAGAGGGATTCCACCGAACTTGAAAAGCTTCTCAGCAGTAAACTGCAAATCATTGAGTCCGAGGTGCACAAGCGTGTTACTCAATCAGGAACTGCACCAGGGTAGAAGCACCGAGTTTGCGATGCCAGGTGGAAGCATTCCAAGGTGGTTTGAGAGGCGCAGCAGTGGAGCTTCTATTTCTTTCTGGTTTCGTGGCACCGAATTCTCTGACAGTGCTTTTTGCTTAGCAATTCTACTCAAAGATGACATCCCTTCCCCACTTCTAGTATACCCCACTGTGACCATCAATGGCAACCAAGTTGAATATGGATGGCGGAGCAATGTGGATCAATTATTTATTTTTAGGATGAACACCAGATGTTATGATTATAAAGCACTACATTTTGAAAGAGGATGGAATCATGTGAAGCTTTCATATGAAGCATGTAACTATCATGGGGAAGAGGTCCCAAGTGAGTCAATTGCAAAAGAGATTGGAATGCACGTATGGAAGCAAGAGAGTAGTAATATAATGGAAGATATTCGATTCACTGATCCTTACAGAAAGAGAAAACGAGATGATGAAGCTCTCAATAGTATTGCACAAGTTATGGAGGGAGAGGGGCAGCGCTGGTGTCTGTCCAAGACAAGAAATGAAGATGACATCTTGAGTCTGCCAATGCCAAAGAAGGCTTGTTTTCAGTTCAGTTCGGATGCAAGCTAA 1458 0.4074 MSPKLDSLSKMSITLKVLNFDYSDSLKEILDVSNLQNVEEFSFEGCSNLVSVHSSVGFLPKLKILNAKRCPKLRSFPPDINLTSLETLGLSGCSSLEKFPEIPEKMENLEVLDLSDNGIKDLPCSFCNLSRLQRLYLRVNEMYRIPSVIGMMPRLYACDIELRGNKGRVSGEQEEGLHGILTHSLPSSHLENLYVRNSNLSYDFFPVAVAWFPNLKVLYLRGSNFTVLPECIQQFRFLYALDVDDCEHLREIRGIPPNLKSFSAVNCKSLSPRCTSVLLNQELHQGRSTEFAMPGGSIPRWFERRSSGASISFWFRGTEFSDSAFCLAILLKDDIPSPLLVYPTVTINGNQVEYGWRSNVDQLFIFRMNTRCYDYKALHFERGWNHVKLSYEACNYHGEEVPSESIAKEIGMHVWKQESSNIMEDIRFTDPYRKRKRDDEALNSIAQVMEGEGQRWCLSKTRNEDDILSLPMPKKACFQFSSDAS* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3183 485 PANTHER NB-ARC DOMAIN PROTEIN 16 332 - -
Ahy15g3183 485 SMART LRR_typ_2 212 234 IPR003591 -
Ahy15g3183 485 SMART LRR_typ_2 106 128 IPR003591 -
Ahy15g3183 485 SMART LRR_typ_2 129 152 IPR003591 -
Ahy15g3183 485 Gene3D Ribonuclease Inhibitor 106 285 IPR032675 -
Ahy15g3183 485 Gene3D Ribonuclease Inhibitor 3 105 IPR032675 -
Ahy15g3183 485 ProSiteProfiles Leucine-rich repeat profile. 108 130 IPR001611 GO:0005515
Ahy15g3183 485 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 332 IPR044974 GO:0006952
Ahy15g3183 485 SUPERFAMILY L domain-like 12 271 - -
Ahy15g3183 485 Pfam Leucine rich repeat 84 140 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3183 Ahy-Chr15 153865792 153868284 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3183 15 137 WRKY Transcription Factor Family AT4G12020 41.463 7.78e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3183 - - ahf:112749300 992.26