Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3178 ATGCCTCTGCAATCTTCCTTCTCCTCCTTTTCCACCCATTCTTCTACTTCTTCCTTCGGCTATGCATGGGAATATGATGTGTTTATTAGTTTCAGAGGCGAAGATACTCGCTATGGTTTCACTGGCAACCTCTACAAAGCTCTTTTTGATAAAGGAGTCCACACCTTCATTGATGATGAGGAGCTTCAAAGAGGAGACCAAATCACACCCTCACTTCTCAAGGCAATTGAAGAGTCCAGGATTGCCATCATTGTTCTCTCTCCTAACTATGCTTCTTCTTTTTGCTTAGACGAGCTTGTCCACATCCTTCACTGCATCAAGGGAAATCATCGGCTGGTTTTACCGGTTTTCTATGAGGTTGATCCTTCGGATGTGTGCCATCAAAGAAATAGTTTCGGAGAAGCAATGGCCAAGCATGAAGAGAAATTCAAGAGTGACTTGAACAAGGTGCACAAATGGAAGCAGGCTCTGCATCAAGTAGCTAATTTGTCAGGATATCATTTCAAACACGGGGATGGATATGAACATAAGTTTATCAGAAATATTGTGGAAGAAATTTCAAGAAAGATTAGACGTGTACCTTTGTTTGTTGCTCGTTTTCCTGTTGGACTAGATTCACTAGATTCTCGAGTGTCAAAAGTAATTTCACTTTTGAGAATGAATTCTAGTGATCAAGTTCACATGGTAGGGATTCATGGAGTTGGTGGAATAGGAAAAACAGCACTTGCTTGTGCTGTTCATAATTTGATTGCTGACCATTTTGACAGTACGTGCTTTCTTGAAGATGTGAGAGAAAACTCAAAGAGACATGGCTTGGCTCATCTTCAAAATATCCTTCTCTCTGAGATATTAGGAAAGGAGGAAATTAAGATAGTCAGTGTTCAACAAGGAACTTCTCGAATCCAACGAAGGCTATGTCAAAAGCAAGTCCTTTTGATTTTAGATGATGTTGATGATCACAAACAACTACAGGCTATTGCTGGAAAACCTGACTGGTTTGGTCCTGGAAGCAGAGTTATTATTACAACACGGGACACACATTTGCTAAAATATCATGGTGTTGAAAACACATATGAGGTAAAGGGTTTAGATGAGGCAGAGTCTTCTCAATTGCTTGTTAAACATGCATTTAAAAATGGTTATGATAGCAGCTCCAATTATGGGGATGTTTTGACCCGTACAATAACTTATGCTTCTGGTCTTCCATTGGCTTTGGAAGTAATAGGTAGTCACTTGTGTGGGAAAAAAGTAGACGAATGGGAATCTGCATTGAATAAATTTGATAGACATCTTGACGATAAAATACATGAGATACTTCGAGTAAGTTTTGATGCTTTGGGAAAAGAAGAGCAGAGCGTTTTTCTTGATATTGCCTGTTGTTTCAAAGGATATGAATTAAAGGAAATTACAGATCTACTTCAAGCTCATTATGGGAGTTGTATGAAATATCATATTGGAGTGCTTTTTGAAAAATCTCTCATAAAGATCAATTTGTATGATCTCACTGTGACAATGCATGATTTGATAGAGAACATGGGCAAAGAAATTGCACTAGAAGAATCACCAGAAATGCCTGGAAAGCGTAGTAGGCTATGGTTCTACGAAGAAATAGTTAAAGTTTTACAAGATAATCTAGGTACTAGCACCATTGAAATCATATATTTGGAATTTCCGTTATTGGAAAGGGAAGGAGATGAAGATTCATTTGAAAGAGAGGAAAATAAAGATATTGAAGTAAAATGGGACGGAACAGCTTTTAAAGAGATGAAAAATCTCAAAACGCTTATCATAAAAAATGGTTGTTTTTCTGAATGTCCCAAATATCTTCCGAACAGTTTAAGGGTATTGGAATGGTGGAGATATCCTTCAGAGTGGCTACCAAATGATTTTCAACCAAAGAAACTCTCCATACTCAAGTTATCGAATAATCTCTATTTGGCACACAAGTTGGATAGCTTATCCAAGAAGTTGGGGAGTTTGAAAGTTTTGAATTTTGATTACAATGATTCTTTGAAAGAAATAGCTGATGTGTCTAGTCTTCAAACTTTAGAAGAATTTTCGTTCCGAGGATGCAAAAACTTAGTTAAAGTTCACAGTTCAGTTGGGTTTCTATCTAAACTTAAAAGATTGAATGCTGAATATTGCGAGAAGCTCAGGACTTTCCCAGCGGCTATCAAATTGCCCTTACTGAAATATTTCAGTCTATGTGGTTGCTCAAGCCTGGTCAATTTTCCAGAAATTTTAGAAGAGATAGCAAATGTAGGATGGCTTGATTTGAAAGGCACTGGCATAAAAGATTTGCCATGCTCATTTCATAATCTTTCTGGATTGCAAAGTCTGGAAATTATTTGGAATGAAACGTGTAAGATACCAAGCATCATTTTTATGATGCCACAACTATCTTCATGTTGTATTGAGGGAGGAGGCAAGAGGAGGGTATCATTGGAAAAGCCGGAGGAGGATGAGGAGGAGGGGCTTCAAGGAATACTCACTCACTCCCTCCCCTCGCAACATATGATGAAAGCTCTTTGTCTCAGCAACACCAATCTGTCCGATGATTTTTTTCCACTAGCTGTTGCATGGCTTCCAAATGTGAGACAATTAATCCTAACAGGCAATAATTTCACAGTCCTTCCTGAATGCATGAAAGAATTTTGCTTTTTATACTTGCTCAACGTCAATGATTGCAACCATCTTCAGGAGATTCGAGGGATTCCACCTTGCTTGACAAACTTCTCAGCAGTAAACTGCAAATCCTTGAGTTCTAGAGCCACAAGAGTTTTACTCAATCAGGAATTACATGAGGGTAGATGGACAATCTTTGCAATGCCAGGTGGAAGGATTCCAAGATGGTTTGAGAAGCGCTGCAGCGGAGCTTCTATTTCATTCTGGTTTCATGGCACTGAATTCCCTGACAATGCTCTTTTCTTTGCAATTCTACTCAGAGATGGCCTCCCTTCCCCAGTTGAAGTACTACCCATCGTGACTGTCAACAGCAACCAAGTTTCCTGTCGATGGCGGGAGACCCCAGTGGATCAATTATTTATTTTTCATCTGTCAGAGACAATTGCTTATAATGTAATACTACGTTTTGAAAACAAATGGAATCATGCAGAGATTTCATATGAAGCACATGATTACTATACCTATGATGAGGTCCCCACTGAGCCAATTGCAAAAGAGATTGGAATCCATCTATTGAAGCAAAAGATCAGTAGCAGTATAATTCAAGATATCCGATTCACTGATCCTTACAAAATGACACAACTAATCATAATGATGATGATGATCTCAATAGTATTGCCCAACCATAAGAAGCAGCCCTTACTCCTTGAAACATCCATTGGTTTGTGGACATTGCTGTTCCTAACACACACTCTTTTTTTTGGATAA 3393 0.3861 MPLQSSFSSFSTHSSTSSFGYAWEYDVFISFRGEDTRYGFTGNLYKALFDKGVHTFIDDEELQRGDQITPSLLKAIEESRIAIIVLSPNYASSFCLDELVHILHCIKGNHRLVLPVFYEVDPSDVCHQRNSFGEAMAKHEEKFKSDLNKVHKWKQALHQVANLSGYHFKHGDGYEHKFIRNIVEEISRKIRRVPLFVARFPVGLDSLDSRVSKVISLLRMNSSDQVHMVGIHGVGGIGKTALACAVHNLIADHFDSTCFLEDVRENSKRHGLAHLQNILLSEILGKEEIKIVSVQQGTSRIQRRLCQKQVLLILDDVDDHKQLQAIAGKPDWFGPGSRVIITTRDTHLLKYHGVENTYEVKGLDEAESSQLLVKHAFKNGYDSSSNYGDVLTRTITYASGLPLALEVIGSHLCGKKVDEWESALNKFDRHLDDKIHEILRVSFDALGKEEQSVFLDIACCFKGYELKEITDLLQAHYGSCMKYHIGVLFEKSLIKINLYDLTVTMHDLIENMGKEIALEESPEMPGKRSRLWFYEEIVKVLQDNLGTSTIEIIYLEFPLLEREGDEDSFEREENKDIEVKWDGTAFKEMKNLKTLIIKNGCFSECPKYLPNSLRVLEWWRYPSEWLPNDFQPKKLSILKLSNNLYLAHKLDSLSKKLGSLKVLNFDYNDSLKEIADVSSLQTLEEFSFRGCKNLVKVHSSVGFLSKLKRLNAEYCEKLRTFPAAIKLPLLKYFSLCGCSSLVNFPEILEEIANVGWLDLKGTGIKDLPCSFHNLSGLQSLEIIWNETCKIPSIIFMMPQLSSCCIEGGGKRRVSLEKPEEDEEEGLQGILTHSLPSQHMMKALCLSNTNLSDDFFPLAVAWLPNVRQLILTGNNFTVLPECMKEFCFLYLLNVNDCNHLQEIRGIPPCLTNFSAVNCKSLSSRATRVLLNQELHEGRWTIFAMPGGRIPRWFEKRCSGASISFWFHGTEFPDNALFFAILLRDGLPSPVEVLPIVTVNSNQVSCRWRETPVDQLFIFHLSETIAYNVILRFENKWNHAEISYEAHDYYTYDEVPTEPIAKEIGIHLLKQKISSSIIQDIRFTDPYKMTQLIIMMMMISIVLPNHKKQPLLLETSIGLWTLLFLTHTLFFG* 1131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3178 1130 Gene3D Ribonuclease Inhibitor 748 930 IPR032675 -
Ahy15g3178 1130 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 1042 IPR044974 GO:0006952
Ahy15g3178 1130 SUPERFAMILY "Winged helix" DNA-binding domain 433 542 IPR036390 -
Ahy15g3178 1130 PRINTS Disease resistance protein signature 304 318 - -
Ahy15g3178 1130 PRINTS Disease resistance protein signature 398 412 - -
Ahy15g3178 1130 PRINTS Disease resistance protein signature 655 671 - -
Ahy15g3178 1130 PRINTS Disease resistance protein signature 228 243 - -
Ahy15g3178 1130 SUPERFAMILY L domain-like 583 922 - -
Ahy15g3178 1130 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 166 IPR035897 -
Ahy15g3178 1130 Pfam NB-ARC domain 210 435 IPR002182 GO:0043531
Ahy15g3178 1130 Gene3D - 20 194 IPR035897 -
Ahy15g3178 1130 ProSiteProfiles TIR domain profile. 23 190 IPR000157 GO:0007165
Ahy15g3178 1130 Pfam TIR domain 25 189 IPR000157 GO:0007165
Ahy15g3178 1130 Gene3D - 195 356 IPR027417 -
Ahy15g3178 1130 SMART till_3 24 163 IPR000157 GO:0007165
Ahy15g3178 1130 PANTHER ARCHAEAL ATPASE 34 1042 - -
Ahy15g3178 1130 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 201 457 IPR027417 -
Ahy15g3178 1130 Gene3D Ribonuclease Inhibitor 569 747 IPR032675 -
Ahy15g3178 1130 Gene3D - 362 447 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3178 Ahy-Chr15 153819968 153824252 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3178 19 807 WRKY Transcription Factor Family AT4G12020 29.963 1.07e-76 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3178 - - aip:107644584 2193.31