Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3175 ATGGCACTCCACTCTTCTTCCATAAGCTATGCATGGAAATACCACGTCTTCATTAGCTTCAGAGGCGAAGATACTCGTTACGGTTTTACTGGCTATCTTTATGAAGCTCTTTCTAATAAAGGAATCCACACCTTCATTGATGATGAGGATCTTCCAAAAGGAGATGAAATCACACCCTCACTTCTCAGCTCAATTCAAGAGTCTAGGATTGCCATCATTGTGCTCTCTCCTAACTATGCTTCTTCTTCTTTCTGCTTAGATGAGCTTGTCGAGATCCTTCACTCCGTCAAGGGAAATAATTGGTTGGTTTTGCCGGTTTTCTATAAGGTTGATCCTTCTGATGTGCGCCGTCAAACAAACAGTTTTGGAGAAGCAATGGCTAAACATGAGGAGACATTCAAGAATGACTTGAACAAGGTGAAAAAATGGAAGGAGGCTCTGCATCAAGTGGCTAATTTGTCTGGCTATCATTTCAAACATGGGGTTGGATATGAACATAAGTTTATTAGAATTATTGTGGAAGAAATTTCAAGAAAGATAAGGCGTGAATCTTTGCCTGTTGCTGATTACCCCGTCGGACTAGATTCTCGAGTATCAGAAGTAATTTCACTTTTGGAAATTGAATCTAATGATGCCGTGCATATGGTAGGAATACATGGAGTTGGTGGAATAGGAAAAACAACACTTGCTCTTGCAGTTTATAACTTGATTGCTGATCATTTTGAAGGTGTGTGCTTTCTTGAAAGCATCAGAGAAAATTCAAATAAATATGGGTTGGTATATCTTCAAAATATCCTTCTTTCTCAGATATTAGGAAAGGAGAAAGTTCAGATTGTAGGTGTTAGACAAGGAGCTCCACAAATAGAACAAAGACTTTGTCGAAAGAAGGTTCTTTTGGTTCTGGATGATGTTGATGAACAAGAGCAGTTAAAAGCTGTTGCTGAAAAACCTGAACGGTTTGGTTGTGGTAGCAGAGTCATTATTACAACACGGGACACACATTTGCTAAAACTCCATCGTGTTGAAAGGATATACGAAGTACAAGGTTTAAATAAGAAAGAGTCAATTGATTTGCTTACTTGGAAAGCTTTTAAAATTGATACTGTTAGTCCAAGTTACACAAATATTTTAACTCGTGTAGTAACTTATGCTTCTGGACTTCCATTGACTTTGGAAGTAATAGGTTCTAACTTGTTTGGAAAAGATTTAAAACAATGGGAATCTGCATTAGATCAATATAAAAAAAGTCTCCATATGGTGGGATATCCTTCAAAGTATTTGCCATATGATTTTCAACCAAAGGAACTCTCCATACTCAAGTTGCCCTATGATTTCTCTGTGTCAACCAAGTTGGATAACTTATTTAAGGCAAGTGTACTAAATTCTTTTTTTTTTTCATTTTGCATGTAA 1410 0.3709 MALHSSSISYAWKYHVFISFRGEDTRYGFTGYLYEALSNKGIHTFIDDEDLPKGDEITPSLLSSIQESRIAIIVLSPNYASSSFCLDELVEILHSVKGNNWLVLPVFYKVDPSDVRRQTNSFGEAMAKHEETFKNDLNKVKKWKEALHQVANLSGYHFKHGVGYEHKFIRIIVEEISRKIRRESLPVADYPVGLDSRVSEVISLLEIESNDAVHMVGIHGVGGIGKTTLALAVYNLIADHFEGVCFLESIRENSNKYGLVYLQNILLSQILGKEKVQIVGVRQGAPQIEQRLCRKKVLLVLDDVDEQEQLKAVAEKPERFGCGSRVIITTRDTHLLKLHRVERIYEVQGLNKKESIDLLTWKAFKIDTVSPSYTNILTRVVTYASGLPLTLEVIGSNLFGKDLKQWESALDQYKKSLHMVGYPSKYLPYDFQPKELSILKLPYDFSVSTKLDNLFKASVLNSFFFSFCM* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3175 469 Pfam TIR domain 13 179 IPR000157 GO:0007165
Ahy15g3175 469 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 156 IPR035897 -
Ahy15g3175 469 Pfam NB-ARC domain 197 416 IPR002182 GO:0043531
Ahy15g3175 469 PRINTS Disease resistance protein signature 384 398 - -
Ahy15g3175 469 PRINTS Disease resistance protein signature 215 230 - -
Ahy15g3175 469 PRINTS Disease resistance protein signature 291 305 - -
Ahy15g3175 469 Gene3D - 10 176 IPR035897 -
Ahy15g3175 469 Gene3D - 349 430 IPR042197 -
Ahy15g3175 469 ProSiteProfiles TIR domain profile. 12 184 IPR000157 GO:0007165
Ahy15g3175 469 SMART AAA_5 212 350 IPR003593 -
Ahy15g3175 469 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 416 IPR044974 GO:0006952
Ahy15g3175 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 418 IPR027417 -
Ahy15g3175 469 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 16 416 - -
Ahy15g3175 469 SMART till_3 13 153 IPR000157 GO:0007165
Ahy15g3175 469 Gene3D - 177 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3175 Ahy-Chr15 153773022 153775429 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3175 9 396 WRKY Transcription Factor Family AT4G12020 26.972 1.34e-29 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3175 - - aip:107644581 925.235