Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3158 ATGGCCTTACAGAACATTGGTGCTGCAAACAGTGATGATGCCTTCTATAGGTATAAGATGCCCAAAATGATTACAAAAATCGAGGGTAGAGGGAATGGCATCAAGACAAATATTGTCAATATGGTTGACATTGCCAAGGCATTGGCAAGGCCAGCCTCTTACACAACCAAGTACTTTGGGTGTGAACTTGGAGCCCAGTCAAAGTTTGATGAGAAATCTGGTACTTCTCATGTTAATGGGGCGCACGACACTGCAAAACTTGCTGGCCTTCTTGAGAACTTCATCAAGAAATTTGTTCAATGTTATGGTTGTGGAAACCCCGAAACGGAGATATTGATTACCAAGAGCCAAATGATCCAGCTGAAATGTGCTGCCTGTGGTTTTGTGTCGGATGTGGATATGAGGGACAAGCTGACTACGTTTATTCTGAAGAACCCTCCGGAAACAAAGAAAGGATCCAAAGACAAGAAGGCCATGAGAAGAGCTGAGAAGGAGAGATTGAAGGAAGGTGAGATGGCTGATGAGGAGCAGAAGAAAATAAAAAAGGAGGTTAAGAAGAAAGGCTCATCTACTGTGAAGGATGGCTCTACAAAGCCATCCACTAAGAAGAAAGCTAGTGCCTCCGACGATGACCATATATCTCCTACTCACAGTCAAGTGGATGAGAAAGAAGATGCTTCTCAGGAAGATGATGATGACATCCAATGGCAAACAGATACATCACTAGAGGCTGCTCGCCAACGCATTCAAGAACAGCTAAGTGCTGTAACAGCTGATATGGTCATGCTCTCCACAAATGAGCCGGAGAAGAATGGAAAAACAGCAACCAAGGCAAGCAATGGTTCTCAAAATGGTGACTCAACTAACTACAGTACACTTGTTGAACTGAAGGCAATGCTGAATAAAGGTGTTGGGGCAAAGGATTTGCAGTCTCATCTGGCAGCACTTCCTGCATCTGCTCAAGACAAGACAAATGCTCTATTTGAGGCCTTATTTGAGGGCATCGAGAAAGGATTTGGAAAAGAAGTGATCAAGAAGAAGAGTTACCTTGCCGCTGCAGTCTCTATGGAGGAAGGATCACAGTTACTGTTGCTTGGTGCAATTGAGGCTTTCTGTATGAAGTCTACTTCCAGTGCTCTGAAGGAAGTTGCCCTTATTTTGAAGGCTCTGTATGATGCTGATGTACTGGAGGAAGAGAACGTATTGCAGTGGTATCAAGTTGGGACGAAGGGCATTAACAAGGACTCTAAGATATGGAAGAATGCCAAACCTTTCATTGATTGGCTTCAAAGTGCGGAATCAGAGTCAGAGGAAGATTGA 1320 0.4394 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKSGTSHVNGAHDTAKLAGLLENFIKKFVQCYGCGNPETEILITKSQMIQLKCAACGFVSDVDMRDKLTTFILKNPPETKKGSKDKKAMRRAEKERLKEGEMADEEQKKIKKEVKKKGSSTVKDGSTKPSTKKKASASDDDHISPTHSQVDEKEDASQEDDDDIQWQTDTSLEAARQRIQEQLSAVTADMVMLSTNEPEKNGKTATKASNGSQNGDSTNYSTLVELKAMLNKGVGAKDLQSHLAALPASAQDKTNALFEALFEGIEKGFGKEVIKKKSYLAAAVSMEEGSQLLLLGAIEAFCMKSTSSALKEVALILKALYDADVLEEENVLQWYQVGTKGINKDSKIWKNAKPFIDWLQSAESESEED* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3158 439 CDD W2_eIF5 293 437 - -
Ahy15g3158 439 Gene3D - 290 439 - -
Ahy15g3158 439 Gene3D - 105 145 - -
Ahy15g3158 439 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Ahy15g3158 439 ProSiteProfiles W2 domain profile. 280 439 IPR003307 GO:0005515
Ahy15g3158 439 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Ahy15g3158 439 MobiDBLite consensus disorder prediction 267 286 - -
Ahy15g3158 439 MobiDBLite consensus disorder prediction 148 224 - -
Ahy15g3158 439 SMART 542_3 347 435 IPR003307 GO:0005515
Ahy15g3158 439 Gene3D - 2 104 - -
Ahy15g3158 439 MobiDBLite consensus disorder prediction 266 286 - -
Ahy15g3158 439 SUPERFAMILY ARM repeat 308 433 IPR016024 -
Ahy15g3158 439 MobiDBLite consensus disorder prediction 144 233 - -
Ahy15g3158 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 1 439 - -
Ahy15g3158 439 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Ahy15g3158 439 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 439 IPR045196 GO:0003743|GO:0006413
Ahy15g3158 439 Pfam eIF4-gamma/eIF5/eIF2-epsilon 361 439 IPR003307 GO:0005515
Ahy15g3158 439 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3158 Ahy-Chr15 153600044 153602560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3158 1 432 Eukaryotic Initiation Factors Gene Family AT1G77840 63.242 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3158 K03262 - gmx:100778073 686.797