Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3140 ATGACGATCTCATCAAAATCACTCTCTAAGGTTGTAATAATGCTCATACTTGTTTCTTTCAATCTCAATGTCAGTATGATTGATGGTGAAGTTGATTTTCCTCAACGTTATACGGTTCATGTGACAATGCAAAACAAACTGCCGGATATGCAGCAGCTTGGTATTCATTGCAAGGATAGAACTCACGATTTAGGGTTCAAAGTCGTTCCAGCTGGTCAAAGTTGGACTTTCTATTTCAGTCCAGGGATTATTAACACAGCTTTGTTCTTCTGTAGCTTTAATTGGTATGAGGGGGGAGGAGTACATCGCTTTGATATTTATGATGCTGACCGTGATGGTGGTGTATGCGACCAGTGTACTTGGGACATCCACAATGACGGTCTATGTAGGGTTACGGGCACGGGTGCTCCTAGATGTTTTCATTATAAGGGCGAGTAA 438 0.4178 MTISSKSLSKVVIMLILVSFNLNVSMIDGEVDFPQRYTVHVTMQNKLPDMQQLGIHCKDRTHDLGFKVVPAGQSWTFYFSPGIINTALFFCSFNWYEGGGVHRFDIYDADRDGGVCDQCTWDIHNDGLCRVTGTGAPRCFHYKGE* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3140 145 Pfam Plant self-incompatibility protein S1 40 135 IPR010264 -
Ahy15g3140 145 PANTHER S-PROTEIN HOMOLOG 18-RELATED 16 140 - -
Ahy15g3140 145 PANTHER - 16 140 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3140 Ahy-Chr15 153226029 153226466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3140 41 132 Carbohydrate Esterase AT3G16970 35.417 3.26e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3140 - - ahf:114927777 177.563