Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3131 ATGGCTAGCTGGGTTATTGACATTGGAGGACTTGCAAAGAAAGTGAAGAATAATACACTGCCATTAGCTGATCAAATCAATGACTGTGGAGCATATTGTGAATGTCCAATATGTCATTATCACATTGATAACATTGATGTTTCTCCTGAGTGGCCAGGCTTTCCGGCCGGCGTGAAGTTTGATCCTTCCGACGTAGAACTGTTGGAACATTTGGCAGCAAAATGTTGTGTTGGAAACAAAGTGCCTCATGCCTTTATCCAAGATTTCATCCCAACACTAGAAGGAGACCAAGGAATATGCTACACACATCCAGAAAATCTTCCAGGTGCTAAGAAAGATGGGGCCAGTGTTCATTTCTTTCACAAAACAACTAATGCATATGCTACCGGACAACGAAAGCGTCGAAAGATTAATCATCAACTAGGCCTAAGTGAGGAGCATGTTCGCTGGCATAAGACCGGTAAGACCAAAGCTGTAACAGAAAATGGAGTACACAAGGGCTTCAAGAAGATCATGGTTCTTTACATAAGGCCTAAAAGAGGTGCAAAGCCGAATAAATCGAAATGGGTGATGCATCAGTACCATCTAGGGAATGATGAAGGTGAGAAGGAAGGTGAATATGTGGTTTCAAAGATTTTCTATCAGCAGAAGAAGAAAACTAAGAAGAATAAGCTGAATCCATTGGTGGCTGAAGATTCTGTCATGGCATTACAAGCAAGTCCAAGAACACCGAATCCAAATCCACCAAAACGGCCTCGGACAGGAAAATCTGTTGACTGTGATGACAATTTTGATGAAACTGACCTTATGCTATTCACTCAGGATGGAAAGCCTACTATTCATGGAGAATCTCTTGCCCCACCACCATCTGAAGTTCATGGTGATGAAAATAATGGAGGCTTTAACAACACTGCATTGTTATCTGTTGAAACACAACCTGTTGAAAACTCTGACTTTATTGGATTGGATGATATCTTACTATGCAAGGAACAGACATTAGATTCTTCTTCTGCTTACCTAAATGATTCTGGTTTGAAGTCCAACAATCTGAAAGGCTTTGCTTGCAATGCAAATGGAAATGCAGCTGAATTGTTTGGGGATGTGAATGATTGTTATGGAATTTCAGTGCTGGATAACCTGGGACTGGACAGTCCTCCTGATTTTGATCTTTCTAATTTGCAATTTTGTTCTCAAGACAATATCATTGACCTTCAATGGCTGGACATACCATAA 1233 0.4071 MASWVIDIGGLAKKVKNNTLPLADQINDCGAYCECPICHYHIDNIDVSPEWPGFPAGVKFDPSDVELLEHLAAKCCVGNKVPHAFIQDFIPTLEGDQGICYTHPENLPGAKKDGASVHFFHKTTNAYATGQRKRRKINHQLGLSEEHVRWHKTGKTKAVTENGVHKGFKKIMVLYIRPKRGAKPNKSKWVMHQYHLGNDEGEKEGEYVVSKIFYQQKKKTKKNKLNPLVAEDSVMALQASPRTPNPNPPKRPRTGKSVDCDDNFDETDLMLFTQDGKPTIHGESLAPPPSEVHGDENNGGFNNTALLSVETQPVENSDFIGLDDILLCKEQTLDSSSAYLNDSGLKSNNLKGFACNANGNAAELFGDVNDCYGISVLDNLGLDSPPDFDLSNLQFCSQDNIIDLQWLDIP* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3131 410 MobiDBLite consensus disorder prediction 236 259 - -
Ahy15g3131 410 SUPERFAMILY NAC domain 39 215 IPR036093 GO:0003677|GO:0006355
Ahy15g3131 410 ProSiteProfiles NAC domain profile. 54 215 IPR003441 GO:0003677|GO:0006355
Ahy15g3131 410 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 408 IPR044799 GO:0003700
Ahy15g3131 410 PANTHER NAC DOMAIN CONTAINING PROTEIN 44-RELATED 3 408 - -
Ahy15g3131 410 Gene3D NAC domain 63 221 IPR036093 GO:0003677|GO:0006355
Ahy15g3131 410 Pfam No apical meristem (NAM) protein 55 196 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3131 Ahy-Chr15 153065172 153069751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3131 35 219 NAC Transcription Factor Family AT1G28470 52.632 2.63e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy15g3131 NAM 9.80E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3131 - - ahf:112799760 543.888