Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3093 ATGAATGTGCCAAACGGAGATAGAGTGCTGATATGGGACTTTTCTAACAAAACTGTGACTGCAACAACAACTATTCATCATGCAGCTCCGCTGCTGGTTACAGAGAAGGATCCAAGGGCCAATGCCAATGCTCGTCCCCGCCGCCGCAACCACATTCGTAGCCAAAGGGCTAATGCTAATGCGCCTCCCACTGGCAACCACATTCATGGTCAATGGACACCGGATCAGGACATGACTTTGGAAGCATTAGTGAATGAGAATAAGCTGAAGAAATGGTCACAAATTGCAAAGTTACTTGGTGGCAGGAATGGGAAGCAGTGTAGAGAAAGATGGCACAACCATCTCCAGCCAAATCTTAAGAAAGGGCCATGGACCTGGAAAGAAGACATGATTCTGATCAAAGCCCACAAAGAAGCTGGTGGAAATAAATGGGCCGAGATTTCAAAGAGATTGCCAGGTAGGACTGATAACTCCGTCAAAAATCGTTGGAATACAATTAAGAGGAGTAGGCCCACAAAAAAGTTCAAGCTCATTAGGCCCAATAACAACAATAATTTTGATGGGTCAAAAATGCTCAAAGCCTATATCAATGCAGTGGCTGCAGCCCAAGCAGAAGTAGCAACTTCATCAAAGTCAAAGTCAAAGTCAAAATCGAAGAGTGATTCCGACAAGAATAAGGGCAAGGCCAGGATTAAAATTGATCTCAATTCTATTCCCTTGGAGTTTCCAAATGATGACGTCATCAACATTCATGGAAGTGATGTTGGTGGTGAATATGGCAACTAG 786 0.4402 MNVPNGDRVLIWDFSNKTVTATTTIHHAAPLLVTEKDPRANANARPRRRNHIRSQRANANAPPTGNHIHGQWTPDQDMTLEALVNENKLKKWSQIAKLLGGRNGKQCRERWHNHLQPNLKKGPWTWKEDMILIKAHKEAGGNKWAEISKRLPGRTDNSVKNRWNTIKRSRPTKKFKLIRPNNNNNFDGSKMLKAYINAVAAAQAEVATSSKSKSKSKSKSDSDKNKGKARIKIDLNSIPLEFPNDDVINIHGSDVGGEYGN* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3093 261 MobiDBLite consensus disorder prediction 212 230 - -
Ahy15g3093 261 MobiDBLite consensus disorder prediction 206 230 - -
Ahy15g3093 261 Pfam Myb-like DNA-binding domain 70 115 IPR001005 -
Ahy15g3093 261 Pfam Myb-like DNA-binding domain 121 166 IPR001005 -
Ahy15g3093 261 SMART sant 68 117 IPR001005 -
Ahy15g3093 261 SMART sant 120 169 IPR001005 -
Ahy15g3093 261 MobiDBLite consensus disorder prediction 37 69 - -
Ahy15g3093 261 CDD SANT 72 115 IPR001005 -
Ahy15g3093 261 ProSiteProfiles Myb-like domain profile. 116 167 IPR001005 -
Ahy15g3093 261 Gene3D - 123 174 - -
Ahy15g3093 261 PANTHER MYB DOMAIN PROTEIN 100-RELATED 48 224 - -
Ahy15g3093 261 SUPERFAMILY Homeodomain-like 95 170 IPR009057 -
Ahy15g3093 261 MobiDBLite consensus disorder prediction 55 69 - -
Ahy15g3093 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 115 IPR017930 -
Ahy15g3093 261 Gene3D - 71 120 - -
Ahy15g3093 261 CDD SANT 123 167 IPR001005 -
Ahy15g3093 261 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 171 IPR017930 -
Ahy15g3093 261 ProSiteProfiles Myb-like domain profile. 70 115 IPR001005 -
Ahy15g3093 261 PANTHER MYB PROTEIN-RELATED 48 224 - -
Ahy15g3093 261 SUPERFAMILY Homeodomain-like 61 111 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3093 Ahy-Chr15 152415057 152423217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3093 68 174 MYB Transcription Factor Family AT4G18770 58.879 1.67e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy15g3093 Myb_DNA-binding 1.40E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3093 - K09422 aip:110263065 496.123