Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3040 ATGATGAACCTTTCCTTCTTTGGTAGGAAGCTACAACATCTTTTTAGCCCTTATTTCCAATTCAACTTCAACTCATTTTTCATTCAGCTTTGTTATTTTATGATCATGTCTCTTTTTGGATACTTGGGTCTCAAGGTATCAAAGCCAAAAACCTATGTTAAGCCTAAGAACTTCGACCTGTTTTATACTTCTGTCTCTGCTTCTACTGTCTCAAGTATGACGGCCATAGAAATGGAAGTTTTCTCTAACTCCCAACTCGTCCTCATAACTTTTCTTATGTTTTTTGGTGGTGAAGTTTTCACTTCCTTACTAGAACTTGTCTTTGCTAGGTTCAATAACAATTCATTCACTTCCATGAAAAATGATTATAGTGTCAAAGTTAGTACTAATAATAGTCTTCCAATAAAAAAAGTCCATGATCAAATTGAGCTTGGTTTAGTTTCTATTCCTAATCATCACTCATCACAAGACCAAAACCAATTCATTCATGTCAATTATGATATTAACAATAAACATGTACTTAGGTCTAACTCCCTTAAGTATTTGAGCCATGTAGTTTTAGGTTACTTTTTGGTGCTTCAATTTGTTGGAACTTTCTTGGTTTCTATGTACATGAGCTTCATTCCTAGTGCAAAGCAAGTACTTAGAGAAAAAGGTATCAAAACCCTAACATTTTCTATTTTCACCATAGTTTCAACTTTTGCAAGTTGTGGCTATGTCCCCACAAATGAAAATATGATAGTTTTCAAGAAGAATTCAGGCCTTCTTATTATTATTCTCCCATATATCCTTCTTGGTAACACCTTGTATGCACCATGCTTGAGGTTTGTGATTTGGGTTCTTGAGAAAATTACCAAAAGAGAGGAATTTTCATACTTGCTTAAGAATTCAAAGGAAATAGGTTTTGGTCATTTGCTACCTCCCCTTCATTCTTGGCTACTTGTTGCTACCGTTTTAGGGTTCAATATAATTCAATTTGTGATTTTTTGTTCCATGGAGTGGGGAACACAAATCATGGATGGTTTGAATCCTTATCAGAAATTTGTTGCGTCTTTGTTTCAAATCACAAATGCTAGACATTCCGGTGAATCCGTTTTTGATCTCTCTACCATCTCTTCAGCCATATTGGTCCTCTTCGTCGTCATGATGTACCTTCCACCATACACAACATTCTTGCCCATAATGGACCACGAGACCGAAAATGATGCCAAGAAAGACAAAAGAAGGCTAGTGGAGTGCCTTGTGTTGTCTCAACTTTCATATTTGGTTATTTTCATTATTTTGATTTGCATCACTGAGAACAAAAGCCTGAGAGAGGATCCTCTCAACTTTAATGTTTTGAACATCACCATAGAAGTCATCAGTGCATATGGAAACGTAGGTTTCTCAATGGGATATAGCTGCGGAAGGCAATTGAAAGCGAATGGTAGTTGCAAAGATTTATGGGTTGGATTTTCTGGGAAATGGAGCAACAAAGGCAAGTTCATCCTTATTCTTGTCATGTTCTTCGGAAGGCTCAAGAAATTCAATATGAAAGGTGGCAAAGCTTGGGACCTATCCTAG 1563 0.3647 MMNLSFFGRKLQHLFSPYFQFNFNSFFIQLCYFMIMSLFGYLGLKVSKPKTYVKPKNFDLFYTSVSASTVSSMTAIEMEVFSNSQLVLITFLMFFGGEVFTSLLELVFARFNNNSFTSMKNDYSVKVSTNNSLPIKKVHDQIELGLVSIPNHHSSQDQNQFIHVNYDINNKHVLRSNSLKYLSHVVLGYFLVLQFVGTFLVSMYMSFIPSAKQVLREKGIKTLTFSIFTIVSTFASCGYVPTNENMIVFKKNSGLLIIILPYILLGNTLYAPCLRFVIWVLEKITKREEFSYLLKNSKEIGFGHLLPPLHSWLLVATVLGFNIIQFVIFCSMEWGTQIMDGLNPYQKFVASLFQITNARHSGESVFDLSTISSAILVLFVVMMYLPPYTTFLPIMDHETENDAKKDKRRLVECLVLSQLSYLVIFIILICITENKSLREDPLNFNVLNITIEVISAYGNVGFSMGYSCGRQLKANGSCKDLWVGFSGKWSNKGKFILILVMFFGRLKKFNMKGGKAWDLS* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3040 520 Pfam Cation transport protein 177 472 IPR003445 GO:0006812|GO:0008324|GO:0055085
Ahy15g3040 520 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 17 520 - -
Ahy15g3040 520 PANTHER SODIUM TRANSPORTER HKT1 17 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3040 Ahy-Chr15 151286233 151289043 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3040 45 519 Inorganic Solute Cotransporters AT4G10310 48.770 5.66e-159 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3040 K24976 - gmx:100779582 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3040 15 151286233 151289043 Ahy15g3040 15 151286233 151289043 ECH
Ahy15g3040 15 151286233 151289043 Ahy5g2231 5 94238763 94244230 hybridization