Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3015 ATGGTAGCAGTGCCAAATCAGGATCACCATCATTCCTCCTTCATCTTCAAAAGGCTCAAGAGGGAGGAATGCAGCCACACCAAACATGATTCTATCTTCTCCAAATGGAAGATTTTAATTGGTGCTTCCGATTGGGAAGATCATTCAAAGGGAAAAGAAGGATGTGCAAGATACAGGATCCATAACCTGCCAGAAAAAGCTTGTCCAGGTGTATATGAGCTTGGAATAGCTGTGTCATCAAGGAGTGATTTGGGGAGGCAAATTTACAAACTTGCCCCTGAGTGTGTAGTTGTGACTTACCTTGGAGAAACTGATAATGTAAGGGATAGGTTGCAATGCTATGGCAGAGATGGATCTCATTTGCACACCAAAACTTCTCTTGAATACTCAATTTATGATTCTCTCCAAAAGAAGAGGCCATTGTTTCAAGAGATTTTTTCACAGGGATACCCTATTGTTTATAGATGGGTTGCTATGAACAATAAAGAAGAGGCCAAGAAAATAGAGTCTCAGCTGCTCAAAACATTTGATTATGCATGGAATATAAGCAGTAATGGTTGCCGGCGGCCGAACGATATTCTTCAAAAGATAAACAAGATTTCTTCCAGCACAAGAACAATCTCAAATATGGCCAGGGAGCTCCTACCTTTCACTCGAAAACAAGTCGGTATCCGAATCAAAGTAGATGAAGAAGAAGAAGACAGTGATGGCATCTACAGTTTCCTATCTAGGGTGTTCAAATTCAACAAATCAAGGCCTAGGAAAGTCAAAAATATCGTCATTGCCAATCAGCAGGATGCTATAATTTGTGGGGTGGCTTTAGGTGATGGTTCTGTCTGTATAAATACACCAGCTGAAAGAAGAAAGAGGTGTCCTCAACACAAAGGAATGAGAATTAATAATGTGTCCCCTGCCAAAGCATTTGTATCCCCAAAATCAAAGAGCAATTTGGTTTCAGAAATCAATAAGTTTATGGACCAAAATGTTAGCAATGATGATGTACAAGGCATTCCAAAAAAACCAGTTGAAGAGAGTAGTAGTGAAACCAATATATGTGGAATCATATTGTATGATGGTTCACCTTGTAGGAGAGTACCGGTTAAAGGAAGGAAAAGGTGCCAAGAGCATAAAGGAAAGAAAATTTGTGCCAAGCAGAAGATGATTTAA 1167 0.3967 MVAVPNQDHHHSSFIFKRLKREECSHTKHDSIFSKWKILIGASDWEDHSKGKEGCARYRIHNLPEKACPGVYELGIAVSSRSDLGRQIYKLAPECVVVTYLGETDNVRDRLQCYGRDGSHLHTKTSLEYSIYDSLQKKRPLFQEIFSQGYPIVYRWVAMNNKEEAKKIESQLLKTFDYAWNISSNGCRRPNDILQKINKISSSTRTISNMARELLPFTRKQVGIRIKVDEEEEDSDGIYSFLSRVFKFNKSRPRKVKNIVIANQQDAIICGVALGDGSVCINTPAERRKRCPQHKGMRINNVSPAKAFVSPKSKSNLVSEINKFMDQNVSNDDVQGIPKKPVEESSSETNICGIILYDGSPCRRVPVKGRKRCQEHKGKKICAKQKMI* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3015 388 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 320 384 - -
Ahy15g3015 388 Pfam GIY-YIG domain-containing protein 33 194 - -
Ahy15g3015 388 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 320 384 IPR038909 GO:0003677|GO:0006355
Ahy15g3015 388 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 16 344 IPR038909 GO:0003677|GO:0006355
Ahy15g3015 388 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 16 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3015 Ahy-Chr15 150966217 150968476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3015 19 383 HRT Transcription Factor Family AT5G56780 42.969 5.33e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Ahy15g3015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3015 - - adu:107490117 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3015 15 150966217 150968476 Ahy15g3015 15 150966217 150968476 ECH