Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3009 ATGGGTCGCCGAAAGAACAACAACGATAACAACAGCATGAACAACCACCTTCGCTTCCAAGACGCCGACGAGGTTATCCAGGACGCCGCCGAGAGCTCCAACCTCGACGACCAATCCATGTGTGAACCTGAACCATCAGAACCATCGTTTATTGATTCCGATGACAAAACCAGCGCCGATTATTATTTCGATTCCTACTCTCATTTCGGAATTCACGAAGAAATGTTGAAGGACACTGTAAGAACAAAAACATATCAAAATGTTATTTATCAGAATAAGTTTTTATTCAAGGATAAAGTAGTTCTTGATGTTGGTGCTGGGACTGGGATTTTGTCTCTATTTTGTGCCAAGGCTGGGGCAGCGCATGTCTATGCTGTTGAGTGCTCCGATATGGCTGACATGGCGAAGCAGATAGTTGAAACTAATGGGTACTCTAATGTTGTAACAGTTTTGAAGGGTAAGATTGAAGAAATTGAACTTCCGGTTGAAAAAGTTGATATAATCATTTCAGAATGGATGGGATATTTCCTATTATTTGAGAATATGTTAAATTCTGTCCTTTACGCACGCGACAAATGGCTTGTCGAAGGAGGAGTTGTGCTACCAGATAAAGCGTCCCTCCATCTTACTGCCATCGAAGATGCAGACTACAAAGAAGATAAAATAGAGTTTTGGAACAATGTATATGGATTTGATATGAGCTGCATCAAGAAGCAAGCCATAATGGAGCCACTTGTTGATACAGTTGACCAGAATCAGATTGCTACTACCTGCCAGCTACTCAAGACTATGGATATCTCAAAGATGGCTCCTGGAGATGCTTCCTTCACAGCACCGTTTAAACTTATTGCTGAACGCGATGATTACATCCATGCTCTTGTTGCATATTTTGATGTAACATTTACTAAGTGTCATAAATTGATGGGCTTCTCTACAGGGCCAAGGTCGCGTGCCACCCATTGGAAACAAACAGTGCTTTATCTGGAAGACATATTGACCATTTGTGAGGGCGAGGCAATTGTAGGGAGCATGAGTGTGGCTCAAAACAAGAAAAATCCGCGCGATGTTGACATAATGGTCAAGTACTCGTTGAATGGTCGCAGATGCAACGTTTCAAGGGTTCAGTATTACAAGATGCGTTGA 1143 0.4217 MGRRKNNNDNNSMNNHLRFQDADEVIQDAAESSNLDDQSMCEPEPSEPSFIDSDDKTSADYYFDSYSHFGIHEEMLKDTVRTKTYQNVIYQNKFLFKDKVVLDVGAGTGILSLFCAKAGAAHVYAVECSDMADMAKQIVETNGYSNVVTVLKGKIEEIELPVEKVDIIISEWMGYFLLFENMLNSVLYARDKWLVEGGVVLPDKASLHLTAIEDADYKEDKIEFWNNVYGFDMSCIKKQAIMEPLVDTVDQNQIATTCQLLKTMDISKMAPGDASFTAPFKLIAERDDYIHALVAYFDVTFTKCHKLMGFSTGPRSRATHWKQTVLYLEDILTICEGEAIVGSMSVAQNKKNPRDVDIMVKYSLNGRRCNVSRVQYYKMR* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3009 380 Pfam Ribosomal protein L11 methyltransferase (PrmA) 95 171 - -
Ahy15g3009 380 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 59 360 IPR025799 GO:0016274|GO:0018216
Ahy15g3009 380 CDD AdoMet_MTases 101 201 - -
Ahy15g3009 380 MobiDBLite consensus disorder prediction 1 55 - -
Ahy15g3009 380 MobiDBLite consensus disorder prediction 1 18 - -
Ahy15g3009 380 Gene3D Vaccinia Virus protein VP39 50 202 IPR029063 -
Ahy15g3009 380 Gene3D - 204 380 - -
Ahy15g3009 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 65 379 IPR029063 -
Ahy15g3009 380 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 34 380 IPR025799 GO:0016274|GO:0018216
Ahy15g3009 380 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1.2-RELATED 34 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3009 Ahy-Chr15 150928857 150931891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3009 15 343 C2H2 Transcription Factor Family AT3G12270 36.752 1.67e-67 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3009 K11434 - gmx:100781777 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3009 15 150928857 150931891 Ahy15g3009 15 150928857 150931891 ECH