Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3004 ATGGATTCCGATGCTCCAGTCATACTACAGAGCGAAAAGTTAGCAAAGTATATAGTGGAAACTGCTGTTTACCCTCGCGAGCCACAGCTTCTTAAAGAGCTGAGGGAACTGACTCAGAATTATCCTAGGGGTTTCATGGGTACTAGTCCTGAATCAGGCCAACTACTGTCAATATTGTTGAAGCTATTGAATGCCAAAAAGACGATTGAAATTGGAGTGTTTACTGGCTACTCTCTTCTTCTTACAGCTCTTAACATTCCTCTTGATGGAAAGATTACAGCCATAGATATTGACAGAAAAGCTTATGAGGTTGGGTTACCATTCATCAAAAAGGCTGGAGTAGAGCACAAGATTGATTTTATAGAGTCTCCAGCTCTGCCAATTTTGGACAAACTATTGCAAGATCCTTCAAACTTGGGAACTTATGACTTCGCCTTCATTGATGCTGACAAATGGAGCTATGTGAAGTACCATGAGAGGCTCATAAATCTGGTGAAGGTTGGTGGGTTGCTTGTCTACGATGACACACTCTTAGGTGGATATGTTGTGTGGCCTGAAGAGGATGTTGAAGCTTCTCACAGACCATATCGAAAAGCTTTAATCGAAGTCAACGACGCACTCGCCACAGACCCACGCGTTGAGATCGCTCTTGCTTCTGTCGGAGACGGACTCACTATTTGCAGGCGCATTGCATGA 696 0.4368 MDSDAPVILQSEKLAKYIVETAVYPREPQLLKELRELTQNYPRGFMGTSPESGQLLSILLKLLNAKKTIEIGVFTGYSLLLTALNIPLDGKITAIDIDRKAYEVGLPFIKKAGVEHKIDFIESPALPILDKLLQDPSNLGTYDFAFIDADKWSYVKYHERLINLVKVGGLLVYDDTLLGGYVVWPEEDVEASHRPYRKALIEVNDALATDPRVEIALASVGDGLTICRRIA* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3004 231 PANTHER O-METHYLTRANSFERASE-RELATED 6 230 - -
Ahy15g3004 231 Pfam O-methyltransferase 20 230 IPR002935 GO:0008171
Ahy15g3004 231 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 7 230 IPR002935 GO:0008171
Ahy15g3004 231 Gene3D Vaccinia Virus protein VP39 2 231 IPR029063 -
Ahy15g3004 231 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 6 230 - -
Ahy15g3004 231 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 12 229 IPR029063 -
Ahy15g3004 231 CDD AdoMet_MTases 69 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3004 Ahy-Chr15 150782420 150786512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g3004 4 230 Monolignol Biosynthesis Gene Families AT4G26220 59.031 1.18e-98 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3004 K00588 - gmx:100800911 331.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g3004 15 150782420 150786512 Ahy15g3004 15 150782420 150786512 ECH