Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g3001 ATGGAATGCTATGGTGGGATGGACAAGATAATCAATTTGTCATCGGATGAAAGTCAATCTGAGTTAGGCCTTCCAAACAATGATGTTGTTGATGAGGATGATTTAGGAAAGGCTGAGTTGTTGTCGGATGAGGATGGTCGTGTGTATGGAGACGTGATTGGGTTGAGTGTCGAGGACATAATGAAAATGGTGTTTCAAAGTGAGGAGCGTGCATATGAGTTTTATTCGAGGCTAGGGAAATGCAACGGATTTGGGATCTATAAGGGAGACTATGCGAAGGATGAAGATGAGACTATAATGAGAATAAGGTTCTTCTGTAACAGGGTTGGCCTAAGGGATGGAAAGCAGTACAACAGATTAGACAAGAAGAGATCTCACAGGCCTGAGACACACACGAATTGTCAGGCCTTGATGTTTGTATACCTTGATAAGGGGAGCTCAATTTGGAAGGTTCGGAAAGTAATCCTCGAGCTTAACCATGAACTGATGCCTAGGGGAATGGTTCACATGATCCGAAGTTGCCGGGTGATATCTGGGTTCGCAAAGGGCCACATGGATGGAATGCATGCGTATGGCTTACCGATATCTAAGATACTAGGGTACATGAGCTGGGATTGA 618 0.4434 MECYGGMDKIINLSSDESQSELGLPNNDVVDEDDLGKAELLSDEDGRVYGDVIGLSVEDIMKMVFQSEERAYEFYSRLGKCNGFGIYKGDYAKDEDETIMRIRFFCNRVGLRDGKQYNRLDKKRSHRPETHTNCQALMFVYLDKGSSIWKVRKVILELNHELMPRGMVHMIRSCRVISGFAKGHMDGMHAYGLPISKILGYMSWD* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g3001 205 Pfam FAR1 DNA-binding domain 73 164 IPR004330 -
Ahy15g3001 205 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 56 171 - -
Ahy15g3001 205 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 56 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g3001 Ahy-Chr15 150773381 150777067 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy15g3001 FAR1 1.80E-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g3001 - K17604 aip:107633916 331.257