Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2984 ATGAATAATAATAAGATAAGCAACTTGAGCTCCGTGAGTAGCTCCGATCTCATAGATGCCAAGCTTGAAGAGCATCAGTGGTGTGGAGGATCCAAGCAGTGCCCCGGTTGCGGCCACAAGTTTGAATCCAAACCGGATTGGCTAGGTTTACCAGCAGGAGTGAAGTTTGATCCAACAGATCAAGAACTAATAGAGCATCTTGAAGCCAAAGTGGAGTCAAAGAACATGAAATCACACCCTTTGATAGATGAATTCATTCCCACCATTGAAGGTGAAGATGGGATTTGTTACACCCATCCTGAGAAACTTCCAGGAGTAACAAGAGATGGATTAAGTAAACACTTCTTCCATAGGCCTTCAAAGGCATACACAACAGGAACAAGAAAGAGGAGAAAGATTCAAAATGAGTGTGACTTGCAAGGTGGAGAAACAAGGTGGCATAAGACCGGTAAAACAAGACCGGTCATGGTTAACGGAAAACAGAAGGGTTGCAAGAAGATTTTGGTACTCTACACTAACTTCGGCAAGAATCGGAAGCCGGAGAAGACGAATTGGGTGATGCATCAATACCATTTGGGGCAACATGAGGAGGAGAAAGAAGGAGAGCTTGTTGTGTCTAAGATATTCTACCAAACTCAGCCTAGGCAGTGTAATTGGTCGTCCGATCGGAGCGCCACCACCACCATCGCAACGGCCGAAGGGAGTGGAGAGCCATTACAAAATAGTAGAAGGGATAGTGGGAGTGGAAGTTGTTCTTCTAAGGAAATTAACATCGGTCATAGGGATGAGATGTCTGCTGTGGTTGGAGTTAATAATACTCCAATCACGAGCTTCACTCATCCCTTGGACATTCATCATCACCTCAAATCGGATCATTTTAGCTTCATTCCATTTAGGAAAAACTTTGATGAGGTTGGAATAGGAGAGGCTTCAACAGCAAGAGAAGTTCAAGCATCAGGGTCATGTGATGAAGTAGTACATGAACATGTAAATCATCATCATCAGCAACAACAACAACATCATCATCATCAACATCATCAAATTGCAACATCGGCATTCCATATAAGTAGGCCTTCACATCCAATCTCTACCTTGATATCTCCACCACCACTTCACCACACATCCATCATCTTAGACGATAATTCCTACCAAGTCTCCAGAATAATGCTCCAAAATGAACATTTCCAGCAACAACAACAACAACAACATCAACACCATCATCATAAAATTGGAGCAAGGTCTGCGTCTGGTTTGGAGGAACTCATCATGGGGTGCACTTCTTCTGATATCAAAGAGGAGTCATCCATCACAAACACACAAGAAGCTGAATGGTTGAAATACTCTTCCTATTGGCCAGACCCTGACAACCCGGATCATCATGGGTAG 1386 0.4343 MNNNKISNLSSVSSSDLIDAKLEEHQWCGGSKQCPGCGHKFESKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSKHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSSDRSATTTIATAEGSGEPLQNSRRDSGSGSCSSKEINIGHRDEMSAVVGVNNTPITSFTHPLDIHHHLKSDHFSFIPFRKNFDEVGIGEASTAREVQASGSCDEVVHEHVNHHHQQQQQHHHHQHHQIATSAFHISRPSHPISTLISPPPLHHTSIILDDNSYQVSRIMLQNEHFQQQQQQQHQHHHHKIGARSASGLEELIMGCTSSDIKEESSITNTQEAEWLKYSSYWPDPDNPDHHG* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2984 461 MobiDBLite consensus disorder prediction 230 255 - -
Ahy15g2984 461 SUPERFAMILY NAC domain 45 211 IPR036093 GO:0003677|GO:0006355
Ahy15g2984 461 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 5 444 - -
Ahy15g2984 461 ProSiteProfiles NAC domain profile. 50 211 IPR003441 GO:0003677|GO:0006355
Ahy15g2984 461 MobiDBLite consensus disorder prediction 230 257 - -
Ahy15g2984 461 Pfam No apical meristem (NAM) protein 51 192 IPR003441 GO:0003677|GO:0006355
Ahy15g2984 461 Gene3D NAC domain 59 215 IPR036093 GO:0003677|GO:0006355
Ahy15g2984 461 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 444 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2984 Ahy-Chr15 150435597 150441197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2984 13 458 NAC Transcription Factor Family AT5G56620 51.702 4.20e-135 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy15g2984 NAM 1.90E-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2984 15 150435597 150441197 Ahy15g2984 15 150435597 150441197 ECH