Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2982 ATGGACAATACCTGGAGACTTGCTTTTCTTATGATCCTCACCCTTCATTCAAACACAATAGTAGCTGAATTTGGTGTTGTTGGTGGTGTAGGTGTTGGTGTTGGTGTTGGCAATGGTGGTGGAGGAGGAGTGGTTTGGGTTGGGGGAGGGGTTAACAACCCACAACCCTCTGGATCTTCTTCAGAATCAAAGCTGGATGGAGCTTACACAGCGCTACAGGCATGGAAATCTGCAATCACTGATGACCCAAAGAAAATTCTAGGAACATGGGTTGGTCCAAATGTGTGTTCTTACAAAGGGGTTTTTTGTGATTTTACTGAAGATGAAATGGGTGCATCTGCATCAGCATTCCCTGTAGTTGCAGGCATAGATCTCAACCATGCAAATCTCCAAGGAACCCTTGTCAAAGAGCTATCTTTACTCACTGACATGTCCCTTTTCCACCTTAACAGTAACAGGTTCACTGGTACTGTTCCTGATGAATTCAGAGACCTCGACACTCTTGAAGAATTTGACCTCAGCAACAACCAATTCTCAGGTTCTTTCCCTTCTGCTACTTTGTACATGCCAAGCCTCATCTACTTGGACCTCAGGTTCAACTACTTCTCCGGGACAATCCCTCAAGAACTCTTCTACAAGAATCTTGATGCACTGTTTCTCAACAACAATCAATTTGAAGGTGAAATCCCTCAGAATCTTGGAAATTCCCCTGCATCAGTGATAAATTTAGCCAACAACAAGTTGAGTGGGAACATCCCAGCAAGTTTTGGATTCATGGGTTCTAAATTGAAGGAGATTCTGTTCCTGAATAACCAGTTAACTGGTTGCATCCCTGAAGGAGTGGGGCTATTCACTGAGATTCAAGTTCTGGATGTTAGCTACAATACTCTCATGGGTCATGTGCCAGACACATTGTCTTGTCTGCAAGACATTCAAGTCCTTAACTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATGTAATATGCTCTCTGAGGAGCCTTGCAAATTTGACTGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAACAATGTTCAAGGCTTTTCTTCAGGAATGTGGGTTTTGATGTCTCACTTAACTGCATTCCTGGAAGGGACATGCAGAGACCTCAACCTGAGTGTTCTGTGATCCCAGGTGGTAGTCTAAGTTGTCTCAGAATTCCAACACCAAAGCCTCTTGTTTGCGGTTCTCTGGCTGTAAGTGCTTCTAAGCACACTAATTCTACTTCATCATCTCCTTGA 1263 0.4363 MDNTWRLAFLMILTLHSNTIVAEFGVVGGVGVGVGVGNGGGGGVVWVGGGVNNPQPSGSSSESKLDGAYTALQAWKSAITDDPKKILGTWVGPNVCSYKGVFCDFTEDEMGASASAFPVVAGIDLNHANLQGTLVKELSLLTDMSLFHLNSNRFTGTVPDEFRDLDTLEEFDLSNNQFSGSFPSATLYMPSLIYLDLRFNYFSGTIPQELFYKNLDALFLNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCIPEGVGLFTEIQVLDVSYNTLMGHVPDTLSCLQDIQVLNLAHNKLSGELSDVICSLRSLANLTVAYNFFSGFSQQCSRLFFRNVGFDVSLNCIPGRDMQRPQPECSVIPGGSLSCLRIPTPKPLVCGSLAVSASKHTNSTSSSP* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2982 420 Pfam Leucine rich repeat 147 201 IPR001611 GO:0005515
Ahy15g2982 420 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 420 - -
Ahy15g2982 420 Gene3D Ribonuclease Inhibitor 68 236 IPR032675 -
Ahy15g2982 420 PANTHER LRR/EXTENSIN 1 420 - -
Ahy15g2982 420 Gene3D Ribonuclease Inhibitor 237 358 IPR032675 -
Ahy15g2982 420 SUPERFAMILY L domain-like 69 354 - -
Ahy15g2982 420 Pfam Leucine rich repeat N-terminal domain 69 104 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2982 Ahy-Chr15 150388728 150390437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2982 56 393 Leucine-rich Repeat extension Gene Families AT3G24480 48.837 3.95e-107 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2982 - - gmx:100775544 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2982 15 150388728 150390437 Ahy15g2982 15 150388728 150390437 ECH