Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2932 ATGGGAGTAGAGCCACGAACACCAAGCTCTGAAACGGAAACAGAAACAGTAGAAACTGGAAGAAGCACTGCCACATGTGCTTCACCACCATCAACACCAACTCTCACATCGAGCAAGAAGCGATCAAGGCAAAGCAATAAAAATGACAATGACAGGAATGCTAACACTAACAGCAAGCACCCTATATACAGAGGGGTCAGAATGCGCACGTGGGGAAAATGGGTCTCCGAAATTCGGGAGCCACGCAAAAAGAGCCGCATCTGGCTCGGAACCTTCGCCACCGCCGACATGGCCGCGCGTGCACACGACGCCGCCGCTCTCACCATCAAAGGCTCCTCCGCCATCCTCAACTTCCCCGAACTCGCACCCTCTCTCCCCCGCCCCGCCTCCAACTCCCCCCGCGACGTCCAGGCAGCCGCCGCCAAAGCCGCCGCAATGATTCCCCCTCCTCCTGCTCCTACTCCTACTACTCCTCCTCCACCGCCGGAGGATGAATCCTCTTCCTCTTCCACCACCACCACCACTACCACCTCCGAGGATGAGGAGCTTGGCGAAATCGTTGAGCTTCCTCCGCTTGGAAACAGCTTCGAAGTAGCTGAAGTAGATCCGAGTGGGATCAACGATCTTGATCAGTTGGTGTTCTTCGATCCGTTTGACGGTAACTGTTACCCTTGGAATCAGGGAAGCATTTATGATGATCACGATCATGATTGTTATGGCTGCTTCATTAATCATAACAATAATAATAACAGCAGCAACATCATGATGTCAATGCTGCTCGAGTCAGATTCTGTTCTTCCTTCTTCTCCTTCTAATCTTTCTATTTCTTCTTCTTCTTCTTTTTCTTCTTCCCTTCAATGTTCTCTCTGGCAACACTAA 879 0.5131 MGVEPRTPSSETETETVETGRSTATCASPPSTPTLTSSKKRSRQSNKNDNDRNANTNSKHPIYRGVRMRTWGKWVSEIREPRKKSRIWLGTFATADMAARAHDAAALTIKGSSAILNFPELAPSLPRPASNSPRDVQAAAAKAAAMIPPPPAPTPTTPPPPPEDESSSSSTTTTTTTSEDEELGEIVELPPLGNSFEVAEVDPSGINDLDQLVFFDPFDGNCYPWNQGSIYDDHDHDCYGCFINHNNNNNSSNIMMSMLLESDSVLPSSPSNLSISSSSSFSSSLQCSLWQH* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2932 292 CDD AP2 61 121 IPR001471 GO:0003700|GO:0006355
Ahy15g2932 292 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE 21 253 - -
Ahy15g2932 292 Gene3D AP2/ERF domain 62 120 IPR036955 GO:0003700|GO:0006355
Ahy15g2932 292 SUPERFAMILY DNA-binding domain 62 120 IPR016177 GO:0003677
Ahy15g2932 292 MobiDBLite consensus disorder prediction 7 41 - -
Ahy15g2932 292 MobiDBLite consensus disorder prediction 126 186 - -
Ahy15g2932 292 SMART rav1_2 62 125 IPR001471 GO:0003700|GO:0006355
Ahy15g2932 292 MobiDBLite consensus disorder prediction 1 64 - -
Ahy15g2932 292 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 253 - -
Ahy15g2932 292 MobiDBLite consensus disorder prediction 146 165 - -
Ahy15g2932 292 MobiDBLite consensus disorder prediction 166 180 - -
Ahy15g2932 292 Pfam AP2 domain 61 111 IPR001471 GO:0003700|GO:0006355
Ahy15g2932 292 PRINTS Ethylene responsive element binding protein signature 85 101 IPR001471 GO:0003700|GO:0006355
Ahy15g2932 292 PRINTS Ethylene responsive element binding protein signature 63 74 IPR001471 GO:0003700|GO:0006355
Ahy15g2932 292 ProSiteProfiles AP2/ERF domain profile. 62 119 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2932 Ahy-Chr15 149326243 149327383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2932 36 252 AP2-EREBP Transcription Factor Family AT5G11590 51.131 1.91e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy15g2932 AP2 5.70E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2932 K09286 - aip:107641289 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2932 15 149326243 149327383 Ahy5g2340 5 96533480 96534983 hybridization
Ahy13g2009 13 35944340 35945758 Ahy15g2932 15 149326243 149327383 PCT
Ahy3g1727 3 33771760 33773113 Ahy15g2932 15 149326243 149327383 PCT
Ahy15g2932 15 149326243 149327383 Ahy13g2009 13 35944340 35945758 PCT
Ahy15g2932 15 149326243 149327383 Ahy3g1727 3 33771760 33773113 PCT