Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2912 ATGAATAGAGGAGTTGTTCATGGGTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAATTGGTGGAACATCAATAGCATGAGGCCTCCTCCTCTTCCACAAGCTCCTCCTTTCTTGTCTACAACTCCTAATTCTTCAAACTTTCTCACCCAATATTCTTCTTCTTCTTCCTCTCTTCCTTTGCCTCCTTCTTGGCATGAAAATCAAGAGCTTCCTGAGTCATGGAGCCAGCTACTCATGGGTGGACTTGTGGGTGAAGAAGATCATCATCAAATGCTAAGTCATCAACATCATCATCAAGGTGCAAATAACAATGCTTCTCTTGTTGATGTTAAGCAAGAAAGCTCAGTTAACAGCTATGTATATGGCCATGGTGGTGCAAATGAAGAACTTCAGCCATCAAAGACTGCATCTTGGTCTCCAAATTCATGTGTCACAAGCTTCAGCAGCAACATGCTTGATTTTTCAAGCAATAATAATAGTGATCATAAGACTAATAATATTGATGCAAGGCATCCACCACCACCACCACCAGATCGATCATCTGAGTGTAACAGCAGTGCAAGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCTTCCACAACTACTCAATCCACATTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCACTTCATCAGCTGGTTTCCCCATTTGGGAAGACTGACACAGCCTCAGTGTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCCCTTAGTTTACCATACTTGAGCAATGGATCAGGGAACACAAGGCATCAACAACATTCTCTGCTGCATGAAAACTGCTTGAAGAGGAAAGCACCTACTAGTGAACAGGATTCTCAAGAAGAGACTAAGAAGGACCTAAGGAGTAGAGGGTTGTGTTTGGTTCCGGTTTCATGCACACTTCAAGTTGGAAGTGACAATGGTGCTGATTATTGGGCTCCAGCCCTTGGTGGCGGTTTTCGGTAG 1005 0.4428 MNRGVVHGSPVQQMMAAGNPNWWNINSMRPPPLPQAPPFLSTTPNSSNFLTQYSSSSSSLPLPPSWHENQELPESWSQLLMGGLVGEEDHHQMLSHQHHHQGANNNASLVDVKQESSVNSYVYGHGGANEELQPSKTASWSPNSCVTSFSSNMLDFSSNNNSDHKTNNIDARHPPPPPPDRSSECNSSASGGAVKKARVQPSTTTQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSNGSGNTRHQQHSLLHENCLKRKAPTSEQDSQEETKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2912 334 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 17 320 - -
Ahy15g2912 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 210 261 IPR036638 GO:0046983
Ahy15g2912 334 MobiDBLite consensus disorder prediction 156 209 - -
Ahy15g2912 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 200 249 IPR011598 GO:0046983
Ahy15g2912 334 PANTHER OS05G0228400 PROTEIN 17 320 - -
Ahy15g2912 334 Gene3D - 205 262 IPR036638 GO:0046983
Ahy15g2912 334 MobiDBLite consensus disorder prediction 40 69 - -
Ahy15g2912 334 MobiDBLite consensus disorder prediction 34 69 - -
Ahy15g2912 334 CDD bHLH_AtbHLH_like 208 257 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2912 Ahy-Chr15 148803551 148809149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2912 1 286 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 44.444 8.09e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2912 - - gmx:100786555 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2912 15 148803551 148809149 Ahy15g2912 15 148803551 148809149 ECH
Ahy15g2912 15 148803551 148809149 Ahy5g2359 5 96980909 96986285 hybridization
Ahy13g2035 13 36760353 36764088 Ahy15g2912 15 148803551 148809149 PCT
Ahy3g1751 3 34502720 34506717 Ahy15g2912 15 148803551 148809149 PCT
Ahy15g2912 15 148803551 148809149 Ahy13g2035 13 36760353 36764088 PCT
Ahy15g2912 15 148803551 148809149 Ahy3g1751 3 34502720 34506717 PCT