Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2910 ATGACTACAGCCGTCACGGCCGCCGAGATTCTCCGTCACACCACCGCCTTCCTCTCCGACGTCATTTCCAACCGCGATCTCCGCCACCGCCTAATCTCCATCCTCCACCAAGACACAACCACCGCCGCAATCTCCGACGAATCTGCCGCGAAACTCGCCGCGGATACTCTTGAAACCGCGATCACGCTCTCCAACTTCGCCTCCCGCTCCTGCTCCCTTTCCCTTGCTGAGAAGCTCCTCCTCCCTCTGTCCGACCACCCGCTTCCTTTCTTCCTCCTCTCACTTGTCCACACCCTCCACAACCGCCACCTCGATGCCGCTGTTTCTCTCCTCCGTTTCTTCCGTTCTAACCCTTCCCTCGCCCGATCGGAGATCGCACCGGTCCTCTACGACCGTCTTTTCTCCCTACAGCTACTCTCCGTGTTCCGGTGGCTGCTGGAACGGAGAGCGCAGATCCTCTCATCATCTTCGGTTTCGGAAGACGCTACTCACTCACTGTCGAAGGTGAGCGAGGAGCAGGCGTCGAAACTGAGGGAGCTGGAGAGAGAGTACGAGGAGATTCTGGATGAGAATTGCAGGGCTGTTGCGGCGCGTTTCGAAGAGGTTTTGGCCAGTGAAAATGCGTTCATTAGTCCGCCATTGCTGGCGAGGAAGAGCTCAGGGGAAGCCGGCGGGGCGGAGAACAATGTGGAGGTGGAGGAGGTGGAGGAGGACGAGGAGGAGCAGTTAGTGATGGAGGAAACAGAAATGATTGCGTTGAAGAGCGGACACTACGATAATCCAATATGGAGCGAAAGGGAAGAAGCCTCCATTGAGTTTTTGAGCAGTGGTTCTTGCAGCAATTCCTCCTACGCACCATTTTATCCACGAAGAGTCTCTCCCACAATCCTCAAACCCCAAAACTCTTCACAAAACTTGGCATCACTCGCTGATGAAACCAAGTCTTCATTGGTTGACAAGAGTTTGACTAGTTCCTCCTCAGAATCAGAAGCAGAAAGAGAGATCACTAGTACTTCATGTTCGAAGAGGACCCCGAATCTGGTTAGAACCGGAAACAAATCCTTGAGTACTCCCAAAATCCTTAAACCACAAAAATCTGCAAAATGTTTGATACCACCACCCTATTTAATAAACTTAGCTGATGAAGCAGAATCTTCTTTGGATAAGAATTTACCTTGTTCATACTCAGAATCTGAAGCAGAAAGTGAGGAAAAGGACGAAAAGATAGCACTACTGGAGCCTCAGAAATTCCAAACCCCAAAACAAACAAAAAATATTTGTTCAGGATCCATGTGTTCTCCAGATTATAACATGGAAGACGAACATGTGCCTCCAGAGGACTTTGTCTGTCCATTAACAAGTAACCTATTTGATGATCCTGTGACCCTTGAGACAGGTCACACATTTGAACGCCATGCTATTGAAGAATGGCTTAAAAGGGGAAACTTAACTTGTCCCATCACTCGCAAGAAGCTGCGAAAGACTCGCTTACCGAAAACAAATCTCGTGCTCAAACAAATAATCTCAAGCTGGAAAGAACAAAATCTCAATTCAGTAGTCGAAATGCCATGTGACAGTCCACATGTAGATACTGAGCTGAAAGTGGAGTGTTCAACTTCTCCTAACAGTGTCATATCAGAGGCGACGCTTGATGGAATGATGAGCGAGTTGCGCAATGCAATCAACAAACTGTATATGTCAGAGGTGCTTGAGGAATCTGAAATGGCTGTGCTTCAAATTGAGAAGATTTGGAGAGAATTGAACCTAATAGTTGTTGATATCCATAGTATGCTATCAAAACCTCCTATCATCAATGGATTCATGGGGGTGCTTCTTAAGTCTTTTGATCCAAAGGTGCTGCAAACAGCAGTTTTCTTGTTAACTGAGATGGGTTGCGTAGACAGTAATGTTATTCAGACGCTTAGCCATGTTGACACTGATGTAGAATGGATCAAGACTCTTTTCAAGAAAGGTGTAAAAGAGGCTGTGGTGTTAATGTATCTCCTAAAACCTTCCACTATCATTCTTTCAGATATGGCAACAGTGGAGGCTCTCATTGCAGTTGTAAATATGAAAGAGGAAGAATTTCTAGAGATGTGTTTGAGTCCCAAAACGGCTGCAGTGCTTTTACTTGCGCAGGTTGTTGGAAGCAGTGAAGAGAGCATTGCATCTTCAGTTGCACAGGCTGTGTTATCCGAAAGAGAAATTGAAGCTATAGTTGGCAGTTTGGGAGCAGAATGGGCAGAGGAGAGGGTTGCTGCGGTTGAGATCTTGTTAAAATGCATGCAAGAAGATGGTACTTGCAGGAATATCATTGCTGATAAGGCACAATTATCTACCTTTTTGGAAAGCCTTGTAGGTGCAACTGAGGGAGAACTTTTCAAGATAGTTAAATTTTTATCTGAGTTGGTAAAACTGAATAGGAGAACAGTCAATGAACAAATCCTTCACATTATAAAGGAAGAAGGTCCTTTAAGCACAATGCACACTCTCCTCATTTCTCTGCAGACAGCTCATCAATTCCATTTTCCAGTAGTGGCTGGCCTCTTACTCCAACTTGATCTTCTGGTGGAGCAAACAAAGATGAGCATATACTCTGAGGAGGCAATAGATACTCTTATCTCATGCTTGAGAAAGACTGATTACCCTGCTGTCCAATTAGAAGCTGCCAAGATAATTGCGTCACTGCAAGGGAGATTCAACTATGCCGGAAAGTCTCTTAGCCGAGAAGTCCTTCTTGAACGTGCTGGTCTTGACAGAAGCTACAACAATTTTCTACAGATGGACCAAATCAGCAACTTCAACGAAGGAATTGAAGCATCTATGAAAGAAGAGAATGCAGCTGAGGACTGGGAAAGAAAAGCTGCATCAGTTCTAGTTAGCCATGACTGTGGTTTACTTTTTGAGGCTTTAGCAGATGGCTTGAAGAGCCAAAATGAAGAACTACGCTCTGCATGCTTTATATCAGCTACATGGCTCATATATATGATCACCATTCTACCAGATACTGGAATACAAGGGGCAGCAAGAGTCTTCTTTCTCAAACACTTCATATTCATATTGAAATCTGCCGAGGACACTGAAGACAGAATCCTTGCCATGCTTGCTCTTAAGAGCTTTCTTCATTTTGATGATGGCTTACGTGATCTTACTTCCTATGCGAAGGATATCCTCAAAGCACTGAGAGAATTAGAGGGGTTCTCTCCCATGGCATCAGAAATTATGAAGGTTTTGGTTGAAGAACCTGAATCTAAAGCAGACATCTGGATTCATAAAGAGGTAACTAAAATAGATTGCAGTGGGAATGGAGAAGTTCTTTCTATCATTTGCTTTGAAGATAAAATCTTTTCAGGGCATTCAGATGGAACTATTAAGGTGTGGAAAGTAAAGGAAAGCATACTCGATCTCTTGCAAGAGATTAAAAGGCATACGAAGGATGTTACAAGCTTGGCAATTTCAGAATCTGGCGACAGATTATACAGCGGTTCACTTGATAAAACTGTAAAGGTCTGGTCCATTGAAATGGCTGCAATACATCATGTACAAGAACATGATATGAAGGACCACATTCATAATTTAGTTGTGACCAATAGTATGTGTTGCTTCAGTCCTCATGGAAGTGGCATCAAGGTTAAGTCATGGAATGGAGAATCTAAGTTGTTAAATTCTAATAAACATGCAAAGTGCTTGGCGCTTGTTCAGGGGAAATTATACTGTGGATGCCATGATAGCAGCATTCAGGAGATCGATTTGGCCACAGGAAAACTCATCAGCATTCAAAGTGGTTCCAAAAAGTTACTTGGGAAAGCAAATCCTATTCATGCACTGAAACTTCATGGTGAATTCATATACGCTACTAGCTCTTCCTTTGATGGATCTGTCATAAAGATATGGAACACAACCAATAATAATCGTATACATATGGTTGGATCATTGCAAACTTCATTGGAAGTGCGAGCTATGGCAGTAAGCTCAGAACTAATTTATTTGGGGTGTAAGGGAGGAGCTGTGGAAATTTGGGATAGAAAGAAATACAATAGAATTAACACATTGCACACCGGATCCAATTATAGGGTTGTTTGCATGGCTTTGAATAGCACTGAGGATATTTTGGTAATTGGAACCTCGGACGGTCAAATTCAGGCATGGGGTGTCAAGTAA 4161 0.4391 MTTAVTAAEILRHTTAFLSDVISNRDLRHRLISILHQDTTTAAISDESAAKLAADTLETAITLSNFASRSCSLSLAEKLLLPLSDHPLPFFLLSLVHTLHNRHLDAAVSLLRFFRSNPSLARSEIAPVLYDRLFSLQLLSVFRWLLERRAQILSSSSVSEDATHSLSKVSEEQASKLRELEREYEEILDENCRAVAARFEEVLASENAFISPPLLARKSSGEAGGAENNVEVEEVEEDEEEQLVMEETEMIALKSGHYDNPIWSEREEASIEFLSSGSCSNSSYAPFYPRRVSPTILKPQNSSQNLASLADETKSSLVDKSLTSSSSESEAEREITSTSCSKRTPNLVRTGNKSLSTPKILKPQKSAKCLIPPPYLINLADEAESSLDKNLPCSYSESEAESEEKDEKIALLEPQKFQTPKQTKNICSGSMCSPDYNMEDEHVPPEDFVCPLTSNLFDDPVTLETGHTFERHAIEEWLKRGNLTCPITRKKLRKTRLPKTNLVLKQIISSWKEQNLNSVVEMPCDSPHVDTELKVECSTSPNSVISEATLDGMMSELRNAINKLYMSEVLEESEMAVLQIEKIWRELNLIVVDIHSMLSKPPIINGFMGVLLKSFDPKVLQTAVFLLTEMGCVDSNVIQTLSHVDTDVEWIKTLFKKGVKEAVVLMYLLKPSTIILSDMATVEALIAVVNMKEEEFLEMCLSPKTAAVLLLAQVVGSSEESIASSVAQAVLSEREIEAIVGSLGAEWAEERVAAVEILLKCMQEDGTCRNIIADKAQLSTFLESLVGATEGELFKIVKFLSELVKLNRRTVNEQILHIIKEEGPLSTMHTLLISLQTAHQFHFPVVAGLLLQLDLLVEQTKMSIYSEEAIDTLISCLRKTDYPAVQLEAAKIIASLQGRFNYAGKSLSREVLLERAGLDRSYNNFLQMDQISNFNEGIEASMKEENAAEDWERKAASVLVSHDCGLLFEALADGLKSQNEELRSACFISATWLIYMITILPDTGIQGAARVFFLKHFIFILKSAEDTEDRILAMLALKSFLHFDDGLRDLTSYAKDILKALRELEGFSPMASEIMKVLVEEPESKADIWIHKEVTKIDCSGNGEVLSIICFEDKIFSGHSDGTIKVWKVKESILDLLQEIKRHTKDVTSLAISESGDRLYSGSLDKTVKVWSIEMAAIHHVQEHDMKDHIHNLVVTNSMCCFSPHGSGIKVKSWNGESKLLNSNKHAKCLALVQGKLYCGCHDSSIQEIDLATGKLISIQSGSKKLLGKANPIHALKLHGEFIYATSSSFDGSVIKIWNTTNNNRIHMVGSLQTSLEVRAMAVSSELIYLGCKGGAVEIWDRKKYNRINTLHTGSNYRVVCMALNSTEDILVIGTSDGQIQAWGVK* 1387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2910 1386 ProSiteProfiles Trp-Asp (WD) repeats profile. 1140 1174 IPR001680 GO:0005515
Ahy15g2910 1386 Gene3D - 1084 1232 IPR015943 GO:0005515
Ahy15g2910 1386 SMART WD40_4 1344 1384 IPR001680 GO:0005515
Ahy15g2910 1386 SMART WD40_4 1133 1172 IPR001680 GO:0005515
Ahy15g2910 1386 SMART WD40_4 1090 1128 IPR001680 GO:0005515
Ahy15g2910 1386 SMART WD40_4 1253 1299 IPR001680 GO:0005515
Ahy15g2910 1386 SMART WD40_4 1305 1341 IPR001680 GO:0005515
Ahy15g2910 1386 Pfam WD domain, G-beta repeat 1091 1128 IPR001680 GO:0005515
Ahy15g2910 1386 Pfam WD domain, G-beta repeat 1136 1172 IPR001680 GO:0005515
Ahy15g2910 1386 SUPERFAMILY RING/U-box 442 516 - -
Ahy15g2910 1386 Coils Coil 170 190 - -
Ahy15g2910 1386 Gene3D - 1233 1386 IPR015943 GO:0005515
Ahy15g2910 1386 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1352 1386 - -
Ahy15g2910 1386 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 432 522 IPR013083 -
Ahy15g2910 1386 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1140 1174 - -
Ahy15g2910 1386 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 5 338 - -
Ahy15g2910 1386 SUPERFAMILY WD40 repeat-like 1095 1385 IPR036322 GO:0005515
Ahy15g2910 1386 SUPERFAMILY ARM repeat 603 1063 IPR016024 -
Ahy15g2910 1386 ProSiteProfiles Trp-Asp (WD) repeats profile. 1352 1386 IPR001680 GO:0005515
Ahy15g2910 1386 MobiDBLite consensus disorder prediction 219 240 - -
Ahy15g2910 1386 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 336 1385 - -
Ahy15g2910 1386 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 5 338 - -
Ahy15g2910 1386 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 336 1385 - -
Ahy15g2910 1386 MobiDBLite consensus disorder prediction 296 357 - -
Ahy15g2910 1386 SMART Ubox_2 447 511 IPR003613 GO:0004842|GO:0016567
Ahy15g2910 1386 Pfam U-box domain 445 515 IPR003613 GO:0004842|GO:0016567
Ahy15g2910 1386 ProSiteProfiles U-box domain profile. 443 518 IPR003613 GO:0004842|GO:0016567
Ahy15g2910 1386 CDD RING-Ubox_PUB 448 490 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2910 Ahy-Chr15 148759104 148766731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2910 433 636 U-box Gene Family AT1G71020 28.922 2.22e-15 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2910 - - lang:109342256 1530
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2910 15 148759104 148766731 Ahy15g2910 15 148759104 148766731 ECH