Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2871 ATGACAGCTCTTTCCAACGGCCACGCCGCTAATAACTCTTCTCTTTTCAAGATCCCACCCATCAAGTTCACCAATCTCTTCATCAATGGCCACTTTGTTCATTCTCTCTCAGGAAACGAGTTTGAGACAATAGATCCGAGAACAGGAGAGGTGATAGCGAAAATCTCGGAGGGAAGAAAAGAAGACATTGATGTGGCTGTTAAAGCGGCACGTGAGGCATTTGACAACGGTCCATGGCCACGCATGTCTGGTGCGGAAAGAGCAAAAATCATGATGAAATGGGCAGATCTTATTGAAGAAAACTTAGAAGAACTAGCGGCATTAGACGCCATTGATGCTGGAAAGTTGTACCACTTAGTTAAGGTCGTGGACATCCCTGCAGTTGCAAATTGTTTACGCTACTATGCCGGTGCTGCCGATAAGATCCATGGCGAGGTGCTAAAAGGTGCTAGAGAGTTCCATGCATATACTTTGATGGAACCAATTGGTGTTGTTGGACACATCATTCCTTGGAATTTCCCTAGCACCATGTTTGCTGCCAAGGTTAGTCCTTCCTTGGCTGCCGGTTGCACCGTCGTCCTTAAGCCGGCCGAACAAACACCTCTCTCGGCTCTGTTTTTCGCGCATTTAGCTAAACAGGCTGGAATTCCGGATGGAGTTCTTAATGTAGTACCCGGATTTGGCCCAACTGCTGGTGCTGCAATAAGCTCACACATGGACATTGATAAGGTTAGCTTCACCGGTTCAACAGAAGTAGGCCGTGCCATAATGCACGCGGCGGCTAGCAGCAATCTGAAACCGGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTGATCTTGCTCTCTTGGGAATCTTATTTAATAAGGGAGAAATTTGTGTTGCAAGTTCAAGGGTGTTTGTTCAGGAAGGGATATACGATGAGTTTGAGAAGAAGTTGGTTGAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTCAATCTCAGCAAGGCCCTCAGGTTGACAAGAACCAATTTGAGAAAATCCTTTCATATATAGAGATTGGAAAGCAAGAAGGAGCAACCCTATTAACAGGTGGTAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCTAATGTCAAGGAAAACATGCGTATAGCACAGGATGAAATATTTGGCCCTGTCTTGGCACTGATGAAGTTCAGGACGATTGAGGAAGGAATTAAGAGTGCTAACAACAGCAGATATGGTCTAGCAGCAGGAATAGTGACGAAGAACATAGACACAGCAAACACAGTGTCAAGAGCCATTCGTGCAGGCATTATTTGGATCAATTGCTACTTTGCCTTTGGGAATGACATTCCTTATGGAGGGTATAAGCAGAGTGGGTTTGGAAGAGATTTTGGAATGGAGGGTCTACATAAGTACCTACAAGTTAAATCTGTTGTCACTCCCATATACAATTCTCCTTGGCTTTGA 1515 0.4455 MTALSNGHAANNSSLFKIPPIKFTNLFINGHFVHSLSGNEFETIDPRTGEVIAKISEGRKEDIDVAVKAAREAFDNGPWPRMSGAERAKIMMKWADLIEENLEELAALDAIDAGKLYHLVKVVDIPAVANCLRYYAGAADKIHGEVLKGAREFHAYTLMEPIGVVGHIIPWNFPSTMFAAKVSPSLAAGCTVVLKPAEQTPLSALFFAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTEVGRAIMHAAASSNLKPVSLELGGKSPLLIFDDADVDKAADLALLGILFNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPQSQQGPQVDKNQFEKILSYIEIGKQEGATLLTGGKRVGNKGYYIEPTIFSNVKENMRIAQDEIFGPVLALMKFRTIEEGIKSANNSRYGLAAGIVTKNIDTANTVSRAIRAGIIWINCYFAFGNDIPYGGYKQSGFGRDFGMEGLHKYLQVKSVVTPIYNSPWL* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2871 504 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 298 309 IPR016160 GO:0016491
Ahy15g2871 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 28 492 IPR016162 GO:0016491
Ahy15g2871 504 Pfam Aldehyde dehydrogenase family 37 494 IPR015590 GO:0016491
Ahy15g2871 504 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 270 277 IPR029510 GO:0016491
Ahy15g2871 504 SUPERFAMILY ALDH-like 17 500 IPR016161 GO:0016491
Ahy15g2871 504 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 274 463 IPR016163 GO:0016620
Ahy15g2871 504 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 4 504 - -
Ahy15g2871 504 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 4 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2871 Ahy-Chr15 147614320 147624227 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2871 4 504 Aldehyde Dehydrogenase Gene Family AT3G24503 71.514 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2871 K12355 - gmx:100783920 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2871 15 147614320 147624227 Ahy5g2411 5 98123714 98134130 hybridization
Ahy13g2062 13 37580880 37595667 Ahy15g2871 15 147614320 147624227 PCT
Ahy3g1777 3 35186793 35199155 Ahy15g2871 15 147614320 147624227 PCT
Ahy15g2871 15 147614320 147624227 Ahy13g2062 13 37580880 37595667 PCT
Ahy15g2871 15 147614320 147624227 Ahy3g1777 3 35186793 35199155 PCT