Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2868 ATATCCCATATAATTATAATCCCAAATAATTATCTAGTTGTCCAGCCCAAGGCTCAGGACCTTCGTAATCCCAAGGCCGTGAACCAGGCCCTGAGGTCGGGTGCCGAGGTGCAGACCATCAAAAAATTTGACGCGGGGTCTAACAGGAAGCCCGGGCCTGGGATCAACGCGAGGAAGCTGGAGGAAGGGACAGAGCCCGCGGCGCTGGAGCGGGTGGCGGTGGAGGCGAGGCAGGCCATACAGAAGGCCCGTCTGGATAAGAAGATGAGGCAGGCAGAGTTGGCGAAGCAGATCAACGAGAGGCCGCAGGTGGTGCAGGAGTACGAGAACGGCAAAGCCCAGCCCAACCAGGCTGTGCTCGCTAAGATGGAGAGAGTTCTTGGTTTCAAGCTCAGGGGCGAAATCGGAAAATGA 414 0.5676 ISHIIIIPNNYLVVQPKAQDLRNPKAVNQALRSGAEVQTIKKFDAGSNRKPGPGINARKLEEGTEPAALERVAVEARQAIQKARLDKKMRQAELAKQINERPQVVQEYENGKAQPNQAVLAKMERVLGFKLRGEIGK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2868 137 ProSiteProfiles Cro/C1-type HTH domain profile. 80 135 IPR001387 -
Ahy15g2868 137 SMART mbf_short4 79 134 IPR001387 -
Ahy15g2868 137 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 15 136 - -
Ahy15g2868 137 PANTHER MULTIPROTEIN-BRIDGING FACTOR 1C 15 136 - -
Ahy15g2868 137 Pfam Helix-turn-helix 80 131 IPR001387 -
Ahy15g2868 137 Gene3D - 63 137 IPR010982 GO:0003677
Ahy15g2868 137 SUPERFAMILY lambda repressor-like DNA-binding domains 77 131 IPR010982 GO:0003677
Ahy15g2868 137 CDD HTH_XRE 78 128 IPR001387 -
Ahy15g2868 137 Pfam Multiprotein bridging factor 1 15 72 IPR013729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2868 Ahy-Chr15 147482912 147483853 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Ahy15g2868 MBF1 4.10E-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2868 K03627 - zju:107431864 194.126