Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2866 ATGTCTATTGATATCTCCGATGGCCACGTCAAGATTCCCACCACCGTGAAGTTCACCAAGCTCTTCATCAATGGACAATTTGTCGATTCCCTTTCAGGGAGTGAGTTTGAGACAATAGATCCAAGAACAGGAGAGGTAATTGCGAGAATCTCGGAAGGAAGAAAAGAAGATATTGATGCTGCCGTCGAAGCGGCGCGTGAAGCATTTGACACCGGTCCATGGCCTCGCATGCCCGGAGCTGAGAGGGCCAAAATCATGCTGAAATGGGCAGATCTGATTGATCAAAACGCATCAGAGTTAGCAGCATTGGATGCCATTGATGCTGGAAAGTTGTACAATAGGTGCAAGGCCCATGAAATTCCTGCAGCAGCAAATATGCTGCGCTACTATGCCGGTGCTGCCGATAAGATCCATGGTGAGGTGCTAAAAGCATCTGGAGAGTTCCATGCATATACTTTGATGGAACCGGTTGGTGTTGTTGGACACATCATTCCATGGAATTTTCCTAGTAATATGTTTTTCATTAAGGTTAGTCCAGCATTGGCTGCTGGTTGCACCATGGTACTTAAACCTGCCGAACAAACACCGCTGTCGGCTTTGTTTTATGCTCATTTAGCTAAGCAGGCTGGAATTCCAGATGGTGTGCTCAATGTAGTACCAGGATTTGGACCCACTGCTGGTGCCGCAATATCCTCACACATGAATGTTGATAAGGTTAGCTTCACCGGTTCGACAGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATTTTTGATGATGCTGATGTGGATAAAGCTGCTAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGTTGCAAGTTCACGTGTGTTTGTTCAGGAAGGGATATATGATGAATTTGAGAAGAAGTTGGTAGAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGACCCTAAATCTCAGCAAGGCCCTCAGATTGATAAAAAGCAATTTGAAAAAATTCTTTCCTACATAGAGCATGGAAAGAAAGAAGGAGCCACCCTTTTATGTGGGGGTAAAAGATTAGGAGACAAGGGCTACTACATTGAGCCAACAATTTTCTCTAATGTTAAGGGGGACATGCTTATAGCACAAGATGAAATATTTGGCCCTGTGATGTCACTAATGAAATTCAAGACTATTGAAGAGGCAATTATGAGGGCTAATAACACTAAGTATGGGCTAGCAGCAGGAATTGTGACAAAAAATTTGGATATTGCAAACACAGTGTCCAGATCCATTCGTGCAGGCATTGTTTGGATCAACTGCTATTTCATATTTGGGAGTGACATTCCTTATGGAGGGTATAAGCAGAGTGGATTTGGAAGAGAATATGGAATGCAAGCACTCCACCAGTACCTACAACAGAAATCTGTTGTAACTCCAATTTACAACTCTCCTTGGCTTTGA 1500 0.4353 MSIDISDGHVKIPTTVKFTKLFINGQFVDSLSGSEFETIDPRTGEVIARISEGRKEDIDAAVEAAREAFDTGPWPRMPGAERAKIMLKWADLIDQNASELAALDAIDAGKLYNRCKAHEIPAAANMLRYYAGAADKIHGEVLKASGEFHAYTLMEPVGVVGHIIPWNFPSNMFFIKVSPALAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMNVDKVSFTGSTEVGREIMHAAASSNLKQVSLELGGKSPLLIFDDADVDKAASLALLGIVYNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSQQGPQIDKKQFEKILSYIEHGKKEGATLLCGGKRLGDKGYYIEPTIFSNVKGDMLIAQDEIFGPVMSLMKFKTIEEAIMRANNTKYGLAAGIVTKNLDIANTVSRSIRAGIVWINCYFIFGSDIPYGGYKQSGFGREYGMQALHQYLQQKSVVTPIYNSPWL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2866 499 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 293 304 IPR016160 GO:0016491
Ahy15g2866 499 Pfam Aldehyde dehydrogenase family 28 489 IPR015590 GO:0016491
Ahy15g2866 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 458 IPR016163 GO:0016620
Ahy15g2866 499 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 11 499 - -
Ahy15g2866 499 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 11 499 - -
Ahy15g2866 499 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Ahy15g2866 499 SUPERFAMILY ALDH-like 13 495 IPR016161 GO:0016491
Ahy15g2866 499 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 23 487 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2866 Ahy-Chr15 147414338 147423347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2866 10 499 Aldehyde Dehydrogenase Gene Family AT3G24503 72.912 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2866 K12355 - gmx:100783920 855.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2866 15 147414338 147423347 Ahy5g2412 5 98144457 98156713 hybridization
Ahy13g2063 13 37603569 37617894 Ahy15g2866 15 147414338 147423347 PCT
Ahy3g1778 3 35199335 35204490 Ahy15g2866 15 147414338 147423347 PCT
Ahy15g2866 15 147414338 147423347 Ahy13g2063 13 37603569 37617894 PCT
Ahy15g2866 15 147414338 147423347 Ahy3g1778 3 35199335 35204490 PCT