Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2861 ATGGACGACATGGAAGACGACGCAAGGTACCCTCCAAAATCCTTCCCTTTGAACCGACAGAACCCTTCCCACCGCCACAAACACCCAATTAGACCACCCCCATTCCACCACCACAACCCTCGCTACGAGGACCAAGACGATGACGATTACGACGACGAAGAAGAACACGCCGAATTCGAAAACTACGGAAACGATGTCGTTGATAACACCAACAACGAAGACGATGACGACGACTGCGGTAACGGGGGCCAAAACGGGTATTTCAAGAAGAGGAAGGTCGGGGTAGGAGGTTCCCCTGTTCCGACAGGATACGAGTTCGCGCCACGTGTCAAGTACTCATACGGCGATGATTGGTCAGAGCATGCCACGTTCGTGCTGCTTGAGGTTTGGGGTGACAAGTTCCTGCAACTTGGGAGGACAAGTTTGAGGTCTGACGATTGGCTTGAAGTTTCAGAAAAGGTGTCTGATGAATTGAAAGCTGATAAGAGCGTTGCACAATGCAAGAGCATTTTGGATAAGCTCAAGAGAAGGTACAAGAAGGAGAAAGGAAAGGTTGAAGAGTTGGGTTTGGGTTCTTGCAAGTGGGCATTCTTCAAGAAGATGGACATGTTGATGGCTTCGTCGACACGGCAAGAGTATGGTCTCGCTTGTGGCGTCGATGGTGGGGAGTATGTGTTCATGAACACAAGGGTGTACCTTAGTAGGTCCAATGGGTTTGATGAGATGAGGGATAGTCCCGGTGAGAGTGAGAGTGATGAGGATGAGGATGGTTTAGATGGTCATGGTGTTGGGGTTGGGGTTGCTTCTGCGGCAAGGAGGAGGAGTGGTGTTGGTGGTGGTGAGGATGAGGAGGAGGAGAGTTCGTTTCGTGTGCTGGCAGATTCGATTCAGAAGTTTGGGAAGATATACGAGAAGATTGAGAATAGTAAGAGGCAGCAGATGATGGAGTTGGAGAAGATGAGGTTGGATTTCAATAGAGAGCTGGAGTTGCAGAAGAAGCAGATATTGGAGAGGGCTCAGGCCGAGATTGCAAAGATACAGGATGTCGATGAGGATGAAACCGACACTTCTACCGAGAATCTCAGTGAATGA 1092 0.4963 MDDMEDDARYPPKSFPLNRQNPSHRHKHPIRPPPFHHHNPRYEDQDDDDYDDEEEHAEFENYGNDVVDNTNNEDDDDDCGNGGQNGYFKKRKVGVGGSPVPTGYEFAPRVKYSYGDDWSEHATFVLLEVWGDKFLQLGRTSLRSDDWLEVSEKVSDELKADKSVAQCKSILDKLKRRYKKEKGKVEELGLGSCKWAFFKKMDMLMASSTRQEYGLACGVDGGEYVFMNTRVYLSRSNGFDEMRDSPGESESDEDEDGLDGHGVGVGVASAARRRSGVGGGEDEEEESSFRVLADSIQKFGKIYEKIENSKRQQMMELEKMRLDFNRELELQKKQILERAQAEIAKIQDVDEDETDTSTENLSE* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2861 363 MobiDBLite consensus disorder prediction 20 35 - -
Ahy15g2861 363 MobiDBLite consensus disorder prediction 1 94 - -
Ahy15g2861 363 Gene3D - 118 180 - -
Ahy15g2861 363 MobiDBLite consensus disorder prediction 237 264 - -
Ahy15g2861 363 MobiDBLite consensus disorder prediction 45 59 - -
Ahy15g2861 363 Coils Coil 303 345 - -
Ahy15g2861 363 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 43 357 - -
Ahy15g2861 363 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 43 357 IPR044823 -
Ahy15g2861 363 Pfam Myb/SANT-like DNA-binding domain 116 203 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2861 Ahy-Chr15 147344587 147347365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2861 116 345 Trihelix Transcription Factor Family AT1G54060 33.846 4.48e-19 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy15g2861 Myb_DNA-bind_4 4.10E-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2861 15 147344587 147347365 Ahy15g2861 15 147344587 147347365 ECH
Ahy15g2861 15 147344587 147347365 Ahy5g2416 5 98207646 98210484 hybridization