Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2852 ATGAGGAAGAAAGAAGCCATAACCACTCACCATTTCCACCTCATTGCCTTGTTTCTGGGCTCACTCACACTCACCCTCTCCTCCTCCTTCGCCGCCGCAACAAGCACCACAAAGCACGAGTTCAATGGAGCACTCACGGAGGCAGAAACCATGTACATCAAGCAGAGGCAGCTTCTCTACTACAGAGACGAGTACGGAGACAGAGGAGAAGATGTTACAGTGGACCCTACCTTGGTCTTTGAGAACAACCGCATCAGAAACGCATACATAGCCTTACAAGCATGGAAGCAAGCTATTCTCTCTGATCCTCTGAATCTCACCGCTAATTGGGTAGGTCCTAAGGTGTGCGACTACACTGGAGTCTTCTGTGCACCTGCACCTGATGACAACAGGACCCGCACCGTTGCCGGCATTGACCTCAACCATGGCGACATTGCTGGTTACCTGCCTGAGGAGCTTGGCTTGCTCACAGATCTTGCTCTATTCCACATTAACACAAACAGGTTCTGTGGCACACTTCCCCACAAGTTCGACCGTCTCAAGATCCTCTTTGAGTTAGATCTCAGCAACAACCGGTTTGCCGGTAAGTTCCCGGCGGTAGTTCTGCGATTGCCCAAGCTTAAATTTCTAGATCTGAGGTTCAACGAATTTGAAGGCACAGTGCCTTCACAGCTCTTTGATAAAGATCTGGATGCCATTTTCATAAATCATAATCGTTTCGTCTTCGATTTGCCGGATAATTTCGGGAATTCGCCTGTGTCGGTAATAGTTTTGGCGAACAACAAGTTCCACGGCTGTGTGCCTTCAAGCATCGGGAACATGTCAAGGCTGAACGAGATTATTCTGATGAATAACGGTTTCCGTTCTTGTTTTCCGGCAGAGGTAGGGTTGTTGAAGAATCTAACTGTGTTTGATGTGAGCTTCAATCAGCTGGTGGGGCCTTTGCCGGACGCAATTGGTGGAGCGGTGAGCTTGGAGCAGCTTAATGTGGCACACAACTTGCTCTCTGGTGTAATTCCGGCCAGTATTTGTTCTCTGCCAAATTTGGAGAACTTTACATATTCTTATAATTTCTTCACGGGTGAGCCACCGAGGTGTTTGGCTCTGCCGGCCTTTGATGATAGGAAGAACTGCTTGCCTGCTAGGCCACTGCAGCGCTCTGCCGCCCAATGCAGGGCCACGCCTTCAGTGAATTGTGGCTCTTTCAGGTGTAAGCCTTTTGTTCCGTCAATTCCTTCTCCGCCTGTTGCTCTTCCTCCTCCGGTATTATCGCCTCCACCTCCCCCGCCGTCACCACCTCCACCAGTGTATTCTCCACCGCCCCCATCGCCGCCTCCACCAGTGTACTCTCCACCTCCGCCACCACCGTCTCCCCCGCCTCCTTCTCCGCCACCTCCTCCTCCACCAGTTTACTCTCCACCGCCCCCGCCGCCCTCACCACCTCCACCGTCCCCTCCACCGCCGTCTCCGCCTCCACCCGTGTATTCTCCACCTCCACCGCCGCCTTCACCGCCGCCACCTTCCCCGCCTCCTCCGTCACCTCCACCACCTTCGCCATCTCCGCCACCGCCGTCTCCTCCACCACCCTCACCTCCACCTCCGTCGCCGCCGCCACCAGTAGTGTACCCGCCTCCACCCTCACCACCACCTCCTTCACCACCGCCAATTTACTGTGTACGACCACCGCCGCCGCCTCCTCCATCACCGCCACCACCCTCACCACCACCACCGCCAGTGTACTCTCCACCACCACCTGTTTACTACTATAACTCCCCACCACCACCTCATTCGCCACCGCCACCACATTCGCCACCACCTCCACCACCTCACCACTCACCCCCGCCACCACCTCATTCACCACCACCACCCATTTACCCTTACCTCTCACCACCGCCACCCCCTCCTGTCCACTCACCTCCTCCACCAGTCTATTCACCACCACCACCATCACCGCCCCCACCATGTATAGAGCCACCACCACCTCCTCCACTATGTATAGAACCACCCCCACCACCTCCTCCGCCTCCCCCTTCGCCACCACCATGCGAAGAGCATCCACCACCACAACCATCACCACACCCTGCACCTTACCATCCACCACCATCGCCACAGCCTGCACCTTACCATCCACCGCCATCACCATCACCGCCACCAGCACCTGTATATGAAGGGCCCTTGCCACCTGTTATCGGAGTCTCGTATGCATCACCACCACCACCACCTTATTATTGA 2232 0.5547 MRKKEAITTHHFHLIALFLGSLTLTLSSSFAAATSTTKHEFNGALTEAETMYIKQRQLLYYRDEYGDRGEDVTVDPTLVFENNRIRNAYIALQAWKQAILSDPLNLTANWVGPKVCDYTGVFCAPAPDDNRTRTVAGIDLNHGDIAGYLPEELGLLTDLALFHINTNRFCGTLPHKFDRLKILFELDLSNNRFAGKFPAVVLRLPKLKFLDLRFNEFEGTVPSQLFDKDLDAIFINHNRFVFDLPDNFGNSPVSVIVLANNKFHGCVPSSIGNMSRLNEIILMNNGFRSCFPAEVGLLKNLTVFDVSFNQLVGPLPDAIGGAVSLEQLNVAHNLLSGVIPASICSLPNLENFTYSYNFFTGEPPRCLALPAFDDRKNCLPARPLQRSAAQCRATPSVNCGSFRCKPFVPSIPSPPVALPPPVLSPPPPPPSPPPPVYSPPPPSPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPSPSPPPPSPPPPSPPPPSPPPPVVYPPPPSPPPPSPPPIYCVRPPPPPPPSPPPPSPPPPPVYSPPPPVYYYNSPPPPHSPPPPHSPPPPPPHHSPPPPPHSPPPPIYPYLSPPPPPPVHSPPPPVYSPPPPSPPPPCIEPPPPPPLCIEPPPPPPPPPPSPPPCEEHPPPQPSPHPAPYHPPPSPQPAPYHPPPSPSPPPAPVYEGPLPPVIGVSYASPPPPPYY* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2852 743 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 468 - -
Ahy15g2852 743 Gene3D Ribonuclease Inhibitor 89 251 IPR032675 -
Ahy15g2852 743 MobiDBLite consensus disorder prediction 425 551 - -
Ahy15g2852 743 MobiDBLite consensus disorder prediction 666 743 - -
Ahy15g2852 743 SUPERFAMILY L domain-like 90 370 - -
Ahy15g2852 743 MobiDBLite consensus disorder prediction 593 622 - -
Ahy15g2852 743 Gene3D Ribonuclease Inhibitor 253 381 IPR032675 -
Ahy15g2852 743 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 30 468 - -
Ahy15g2852 743 PRINTS Proline rich extensin signature 457 478 - -
Ahy15g2852 743 PRINTS Proline rich extensin signature 444 456 - -
Ahy15g2852 743 PRINTS Proline rich extensin signature 418 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2852 Ahy-Chr15 147139257 147142506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2852 45 404 Leucine-rich Repeat extension Gene Families AT3G24480 75.207 0.0 616
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2852 - - gmx:106799218 652.899