Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2847 ATGACAGAAACAAAGTCAACTAGCAAGATTTCCAAGAAACAGGATTCGAAAAAATATTCTGCTCCCAGCAATCAGCCTTCAAGGAAACAACATCGAAAGGGTGAAAACCCTACTCGATTCATTCCAACCTCCGACCTGCCTTCTGATTTTGGACATTCTGACTCGTGGATCTGTAAGAATTCGGCTTGTAGAGCAGTTCTGTCTAAAGATGATACATTTTGTAGAAGATGTTCTTGCTGTATTTGCCACCTTTTCGATGATAACAAGGACCCTAGTCTTTGGTTGGTTTGCACATCCGACTCAGCCCAAGGGGACTCCTGTGGTATGTCTTGCCACATCGAGTGTGCTCTTCAGCATGAAAAAGTGGGAGTAGTTGATCATGGCCAACTGATGCAACTAGATGGCAGTTATTGTTGTGCATCCTGCGGCAAAGTTACCGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCTCGGCGTTTAGATGTGCTGTGTTACCGGATATATTTGAGCTTCAGGCTTCTGAATGGAAGTTTGAGATTTAAACAACTTCATGAAATTGTACAAGAGGCGAAGGCTAAATTAGAAACGGAAGTTGGTCCAGTTAATGGGGTTTCTTCCAAGATGGCACGCGGCATTGTCAGCAGACTCCCTATTGCCGGTGATGTACAGAAACTCTGCTCTCTTGCTATTGGGAAAGCCGATGAATGGTTGGCCACTGTTCCCAGTTCAAATCCAGAATCCGGAGAGGGCTCCCTTCCCGCGGCCTGCAAGTTTGTTTTCGAAGAGGTAACAGCTTCATCAGTCAAAATAATTTTGATTGGAATATCAAATGCGTCTTCCGAGGAAATTAAGGGTTACAAGCTCTGGTATTACAAGAGTAGGGAGGAATCACACACAAAAGATCCTGTTTGTGTCTTTCCGAAAGCTCAGAGGAGGATTTTGATATCTGATCTCCAGCCATGCACAGAATATACTTTTAGGATTATATCTTATACCGACAAGGGCGATTTAGGTCATTCTGAGGCCAAGTGTTTCACCAAGAGCATAGAGATATTGGAAAAAAGTCCGTCTTCATCGGTTGCCATCGGCCGCAAGAAGGAGAGCCTTCAAACTGGAGACAATTCTTTTGGATCCAAAACGGAGCCGAGTTCTTCAATGTCTGACTCTGGATTTAAAGTTCGAGACCTTGGAAAACTTTTGCATCTTGCCTGGGCTCAAGAACAAGGTTGCTTGGAGGGGTTTTGCGGAGCGGACTTGAGAAATTGCTGTGCACAAAGAGAAATGATTGTGCCTCGCAATCTAGAAGAGCGGTTCCCTTCCGTTTCACGAGGCCTCGATTTAAATGTTGCTTCGGTGCCTGATTTAAATGAAGAACTTACACCTCCTTTCGAGTCTTCCAGGGACGAAGATAATGGTTGCACTTTGCAGCAGGCAGTTGAGCCAGACGACGATGCAGCCTCTCATGATCTCGAAAAAAACTGTTTGGCAGGGTCGGATGGTAGTGGTGATTCCCAAATCTGGACACAAGGGCCGACCGGAGAAGTCCCGGCTGTTGACTCTCGCGTAGATGCATGCAAGAAAAGGTTAGCAAGCTCGAACGAAGAGGCGCATGATTGTGACAGCACTCTGATGAATGGATCTCCTTTACACATACCGGATGGTTCGTTCTCATTGGACGAGAACTTCGAATATTGTGTGAAAGTGATTCGTTGGCTAGAATGCCAGGGTCATATTAAACAGGAGTTTCGGTTGAAGTTGCTGACATGGTTCAGTTTGAGGTCGACGGAGCAAGAACGTAGGGTGGTTAACACGTTCATTCAGACTCTGATAGATGATCCGAGTAGTTTGGCCGGGCAACTCGTCGACTCATTCTCCGATATTATATCAATCAAGAGGGCAAGAAATGGGTTGTGTAACAAAGCTGTGGGATCAAATTAA 1953 0.4521 MTETKSTSKISKKQDSKKYSAPSNQPSRKQHRKGENPTRFIPTSDLPSDFGHSDSWICKNSACRAVLSKDDTFCRRCSCCICHLFDDNKDPSLWLVCTSDSAQGDSCGMSCHIECALQHEKVGVVDHGQLMQLDGSYCCASCGKVTGILGCWKKQLNIAKDARRLDVLCYRIYLSFRLLNGSLRFKQLHEIVQEAKAKLETEVGPVNGVSSKMARGIVSRLPIAGDVQKLCSLAIGKADEWLATVPSSNPESGEGSLPAACKFVFEEVTASSVKIILIGISNASSEEIKGYKLWYYKSREESHTKDPVCVFPKAQRRILISDLQPCTEYTFRIISYTDKGDLGHSEAKCFTKSIEILEKSPSSSVAIGRKKESLQTGDNSFGSKTEPSSSMSDSGFKVRDLGKLLHLAWAQEQGCLEGFCGADLRNCCAQREMIVPRNLEERFPSVSRGLDLNVASVPDLNEELTPPFESSRDEDNGCTLQQAVEPDDDAASHDLEKNCLAGSDGSGDSQIWTQGPTGEVPAVDSRVDACKKRLASSNEEAHDCDSTLMNGSPLHIPDGSFSLDENFEYCVKVIRWLECQGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLIDDPSSLAGQLVDSFSDIISIKRARNGLCNKAVGSN* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2847 650 PANTHER VIN3-LIKE PROTEIN 1 4 646 - -
Ahy15g2847 650 MobiDBLite consensus disorder prediction 1 46 - -
Ahy15g2847 650 Gene3D Immunoglobulins 242 354 IPR013783 -
Ahy15g2847 650 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 646 IPR044514 GO:0010048|GO:0040029
Ahy15g2847 650 Pfam Fibronectin type III domain 264 343 IPR003961 GO:0005515
Ahy15g2847 650 SUPERFAMILY Fibronectin type III 265 346 IPR036116 GO:0005515
Ahy15g2847 650 MobiDBLite consensus disorder prediction 1 16 - -
Ahy15g2847 650 ProSiteProfiles Fibronectin type-III domain profile. 257 356 IPR003961 GO:0005515
Ahy15g2847 650 Pfam PHD - plant homeodomain finger protein 58 176 IPR032881 -
Ahy15g2847 650 MobiDBLite consensus disorder prediction 497 523 - -
Ahy15g2847 650 MobiDBLite consensus disorder prediction 367 394 - -
Ahy15g2847 650 CDD FN3 262 341 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2847 Ahy-Chr15 146942556 146950742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2847 55 642 PHD Gene Family AT3G24440 49.584 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2847 - - gsj:114418583 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2847 15 146942556 146950742 Ahy15g2847 15 146942556 146950742 ECH
Ahy15g2847 15 146942556 146950742 Ahy5g2425 5 98477965 98486151 hybridization
Ahy13g2077 13 38006507 38012567 Ahy15g2847 15 146942556 146950742 PCT
Ahy3g1788 3 35544760 35550906 Ahy15g2847 15 146942556 146950742 PCT
Ahy15g2847 15 146942556 146950742 Ahy13g2077 13 38006507 38012567 PCT
Ahy15g2847 15 146942556 146950742 Ahy3g1788 3 35544760 35550906 PCT