Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2844 ATGAATCGTGTTGCAGAGCGAATGAACCGAGCTCTTAAGGACATGGTCTTTGTATCTATTATTGTTCAAGACACAGTTATAGTACAAGAGCACAATAAGAATCCTACTGTAGATCCAGTTACAGTACAAGAAAACAATGAGAATATCGTTGTTGCTCAAGATGCTGCTACAGCAGTGTTGAAAAAATTTCAGAAGGCACAGCGTCCTGCGGTAGAGAGGGAAACTGCTTACACCGAACCCCATTTGTTCCACAAGCTGCTCCATTCAGCTATACAGCTAATGAAGCAGATGCTAATTCTGGTAAGACTCCAGAACAGTGTGCCCTTCTTGTGGAATTCAAAAGGGTTGAAGGAGGTCTTGTTTTTAGATAATGAGATTGTCTTCAATGAGACTATCATTGAAGAAAGAGAGCATGGCATTCAAGCAATTCAGCAGCAAATTGGTGAAGTAAATGAAATTTTTAAAGACCTTGCTGTGCTTGTGCATGAACAAGGAACTATGATTGGTTTAGTTGTTATTTAG 522 0.3966 MNRVAERMNRALKDMVFVSIIVQDTVIVQEHNKNPTVDPVTVQENNENIVVAQDAATAVLKKFQKAQRPAVERETAYTEPHLFHKLLHSAIQLMKQMLILVRLQNSVPFLWNSKGLKEVLFLDNEIVFNETIIEEREHGIQAIQQQIGEVNEIFKDLAVLVHEQGTMIGLVVI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2844 173 CDD SNARE_Qa 133 168 - -
Ahy15g2844 173 PANTHER SYNTAXIN OF PLANTS PROTEIN 51 169 - -
Ahy15g2844 173 Gene3D - 131 171 - -
Ahy15g2844 173 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 130 173 IPR000727 -
Ahy15g2844 173 SUPERFAMILY t-snare proteins 116 168 IPR010989 GO:0016020|GO:0016192
Ahy15g2844 173 PANTHER SYNTAXIN 51 169 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2844 Ahy-Chr15 146864161 146879651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2844 58 168 SNARE and Associated Proteins AT5G46860 54.955 8.05e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2844 - K08488 aip:107641245 336.65