Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2801 ATGGCGGACGACCAATATGAAGACGGCCGTATGGCATCTGAATCTGAAGCTATTTTTAAATCTTTGCTATACAAAGCTTGCGGCCGGATAGTGAACCCGGTTTTCGGTTCGACCGGGTTGCTATCGACTGAAAGCTGGCACTTGTGCGAAGCAGCTGTTGAAGCCGTTCTTAGCGGCACGCCGATTAGGCAACAGGATGCTTCAGATGGCGGTGACCAGCTGCTAAACCCGTCTGATATTCGCCACGTGGTGAAGAGGGGGAAATCTTGCAGCTCCGATCATGTCCTTAAGCCCCGGAAGAGCCAGTTCAAGAGGCGCGCTGAGAAGTCGAAGCCGGAGCCGGAGGTTAAGCTGGATCAGGGTGTAGCTGAGTTGGTGGTGGAGGCTTGCGTAGTGAATGAGTTAGATGACTCGGCGAGCCCTGACTCAGGGTCTGGTCTGAGTGAGCACGTAAGTGTTGTTGTTGGTGGCGGCGCAGAAGCTGATAGCGGCTCAATTGAGAGTGTCAATCTGGCTCGAGCCGATGACGGGGAGCTTGAGCTGGAGCTGACTTTGGGGTGTCAGTGGCTTTGA 573 0.5445 MADDQYEDGRMASESEAIFKSLLYKACGRIVNPVFGSTGLLSTESWHLCEAAVEAVLSGTPIRQQDASDGGDQLLNPSDIRHVVKRGKSCSSDHVLKPRKSQFKRRAEKSKPEPEVKLDQGVAELVVEACVVNELDDSASPDSGSGLSEHVSVVVGGGAEADSGSIESVNLARADDGELELELTLGCQWL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2801 190 Pfam Lateral organ boundaries (LOB) domain 14 56 IPR004883 -
Ahy15g2801 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 41-LIKE 16 188 - -
Ahy15g2801 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 16 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2801 Ahy-Chr15 145785623 145788712 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2801 17 86 AS2 family AT1G67100 57.333 6.26e-20 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy15g2801 LOB 2.80E-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2801 - - aip:110272137 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3166 19 154731294 154732722 Ahy15g2801 15 145785623 145788712 ECH
Ahy15g2801 15 145785623 145788712 Ahy15g2801 15 145785623 145788712 ECH
Ahy15g2801 15 145785623 145788712 Ahy5g2465 5 99314673 99316055 hybridization