Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2800 ATGCGATTAAGCTGCAACGGTTGTCGTGTCCTTCGCAAGGGTTGCAACCTTGAATGCCCCATTAAACCCTGCCTCCATTGGATCAAATCGCCGGAATCACAGTCCAACGCCACCCTCTTCCTCGCCAAGTTCTACGGCCGCGCTGGCCTCCTCAACCTCCTCACCGCCGGCGATCCCAAGATCCGCCCAGCTATTTTTAAATCTTTGCTATACGAAGCTTGCGGCCGGATAGTGAACCCGGTTTTCGGTTCGACCGGGTTGCTATCGACTGGGAGCTGGCACTTGTGCGAAGCAGCTGTTGAAGCCGTTCTTAGCGGCGCGCCGATTAGACAACAGGATGCTTCAGATGGCGGTGACCAGCTGCTAAACCCGTCTGATATTCGCCACGTGGTGAAGAGGGGGAAATCTTGCAGCTCCGATAATGTCCTTAAGCCCCGGAAGAGCCAGTTCAAGAGGCGCGCTGAGAAGTCGAAGCCGGAGCCGGAGGTTAAGCTGGATCAGGGTGTAGCCGAGTTGGTGGTGGAGGCTTGCGTAGTGAATGAGTTAGATGACTCGGCGAGCCCTGACTCAGGGTCTGGGCTGAGTGAGCACGTAAGTGTTGTTGTTGGCGGCGGTGCAGAAGCTGATAGCGGCTCAATTGAGAGTGTCAATCCGGCTCGAGCCGATGATGGGGAGCTTGAGCTGGAGCTGACTTTGGGGTGTCAGTGGCTTTGA 714 0.563 MRLSCNGCRVLRKGCNLECPIKPCLHWIKSPESQSNATLFLAKFYGRAGLLNLLTAGDPKIRPAIFKSLLYEACGRIVNPVFGSTGLLSTGSWHLCEAAVEAVLSGAPIRQQDASDGGDQLLNPSDIRHVVKRGKSCSSDNVLKPRKSQFKRRAEKSKPEPEVKLDQGVAELVVEACVVNELDDSASPDSGSGLSEHVSVVVGGGAEADSGSIESVNPARADDGELELELTLGCQWL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2800 237 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Ahy15g2800 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 234 - -
Ahy15g2800 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 234 - -
Ahy15g2800 237 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2800 Ahy-Chr15 145783146 145784484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2800 1 232 AS2 family AT3G02550 45.798 2.41e-63 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy15g2800 LOB 1.50E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2800 - - ahf:112802215 461.07