Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2792 ATGGAAGAGAATCTACCTCCTGGATTCAGATTCCACCCAACAGATGAAGAGCTTATAACATATTATCTTACAAGAAAAGTCTCTGAAAATGGATTCACTTCTAAAGCTATTGCTGTTGTTGATCTCAACAAGTCTGAGCCTTGGGATCTTCCAGGTAAGGCAAGCATGGGTGAGAAGGAATGGTACTTCTTCAGTTTAAGAGATAGAAAGTATCCAACAGGACTAAGAACAAATAGGGCAACAGAATCAGGGTATTGGAAGACCACAGGCAAAGACAAAGAGATATTTCGTGGTGGGGTTTTGGTTGGAATGAAGAAAACCCTAGTCTTCTATAAGGGTAGGGCTCCAAGGGGTGAGAAAAGTAATTGGGTCATGCATGAATATAGACTTGAGAACAAGAATCCCTTTAGAACTAAGGATGAATGGGTAGTGTGCAGGGTATTCCAAAAGAGCACAGCAGCGAAAAAACCGCCGCAACAAACATCATCCTCCCAACCTGAATCCCCATGTGATGACACAACCTCTTTGGTCAATGAATTTGGACAACACATTCATCATCACCATGACCTAACCAATAATAACAATAATAACAATGTTAACACAAACATGAACTTAGCAATGAATTGGCCACCATCAAGTGATCATAATGTTCCATGGCCTTCAGTAGGGTTGTTGAATCCAAGTATTTCATCAATGAATTCCTTGATTCTCAAGGCATTGCAGCTTAGGAATAATTATCAACAAAGAGAAGTTGCATCCACATTTGCACCATCATCATATATTATGCCTCATCATCAAGGAGTAGTAGTTCCTCATCAACAAGTTATTATTGGAACCAATAATGATGACCTAATAACAACTTCTTCAAATCTCATCAATGCTTCTTCTTCTTCTTCATCAAAAGTTTTGGAATGTATGCCACATCAGCAACAACAACAACAGGAGCAACCATTCAATTTGGACTCCCTTTGGTAA 975 0.3918 MEENLPPGFRFHPTDEELITYYLTRKVSENGFTSKAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKEIFRGGVLVGMKKTLVFYKGRAPRGEKSNWVMHEYRLENKNPFRTKDEWVVCRVFQKSTAAKKPPQQTSSSQPESPCDDTTSLVNEFGQHIHHHHDLTNNNNNNNVNTNMNLAMNWPPSSDHNVPWPSVGLLNPSISSMNSLILKALQLRNNYQQREVASTFAPSSYIMPHHQGVVVPHQQVIIGTNNDDLITTSSNLINASSSSSSKVLECMPHQQQQQQEQPFNLDSLW* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2792 324 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Ahy15g2792 324 Gene3D NAC domain 14 155 IPR036093 GO:0003677|GO:0006355
Ahy15g2792 324 SUPERFAMILY NAC domain 3 150 IPR036093 GO:0003677|GO:0006355
Ahy15g2792 324 MobiDBLite consensus disorder prediction 153 175 - -
Ahy15g2792 324 ProSiteProfiles NAC domain profile. 5 150 IPR003441 GO:0003677|GO:0006355
Ahy15g2792 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2 3 281 - -
Ahy15g2792 324 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2792 Ahy-Chr15 145546164 145550082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2792 1 324 NAC Transcription Factor Family AT3G18400 55.172 1.74e-116 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy15g2792 NAM 5.80E-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2792 - - aip:107644305 598.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2792 15 145546164 145550082 Ahy15g2792 15 145546164 145550082 ECH
Ahy15g2792 15 145546164 145550082 Ahy5g2474 5 99556768 99560372 hybridization