Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2775 ATGATGGCTCATCACCAATTCACAGAAGATTTTCAAAGCATGATCATGAAACCTTTCTTGGATATTGATCCAAGCATGGATCTCATCAACCAGTTCATAGGTTTGAACACAACAACAACAACAACAACAACACATATGAACATGTGTGACAACTTGTTTGGATCTCATCATCATCATCATCATCACCAAGATGATTTTCAAGGAAACTTGGAAGAAAGTTTCCATCAAAATCATCATCATGTCAACAACAATGCATCATCAGTAGTAGTCCCAGTAATTTCTTCTTCCCTTCTCAATTATTATCCATCAGAAAATGAAGAAGTCCATGAAGGTAAAAAGAGAAAAGCAACAACTTCAGGAAACTCAACTCCTGCAGCTTCTCATCATAGTGAAAGCAAGATTATTAAAAATAATGGTTGTGGTGGAAGAGGTAAGAGAGTGAAGAGCAATAAAACAGAAGAAGAAGAGGAGAAGAAACAAAAGGAAGTGGTTCATGTCAGAGCAAGAAGAGGTCAAGCCACTGATAGTCACAGCATAGCTGAAAGGGTTAGAAGAGGAAAAATCAATGAAAAATTAAGGTGCCTGCAAAACATTGTTCCAGGATGTTACAAGACCATGGGCATGGCGGTTATGTTGGATGAAATCATAAACTATGTTCAATCCTTGCAACATCAAGTAGAGTTCCTTTCTTTGAAGCTCACAGCAGCAAGTACCTTTTATGACTTCAATTCAGAGACAGATGCTTTGGAAACAATGCAGAGAGCAAAGGCATCCGAGGCAAAAGAGTTAGGCAAGTATGGGAAAGAAGGGCATGGAGGAGTTTCTTGCTATCAACCAAATTGGCCTCTTGTTTGA 855 0.386 MMAHHQFTEDFQSMIMKPFLDIDPSMDLINQFIGLNTTTTTTTTHMNMCDNLFGSHHHHHHHQDDFQGNLEESFHQNHHHVNNNASSVVVPVISSSLLNYYPSENEEVHEGKKRKATTSGNSTPAASHHSESKIIKNNGCGGRGKRVKSNKTEEEEEKKQKEVVHVRARRGQATDSHSIAERVRRGKINEKLRCLQNIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSLKLTAASTFYDFNSETDALETMQRAKASEAKELGKYGKEGHGGVSCYQPNWPLV* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2775 284 Pfam Helix-loop-helix DNA-binding domain 176 223 IPR011598 GO:0046983
Ahy15g2775 284 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 238 IPR036638 GO:0046983
Ahy15g2775 284 MobiDBLite consensus disorder prediction 105 162 - -
Ahy15g2775 284 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 6 282 IPR024097 GO:0006355
Ahy15g2775 284 CDD bHLH_AtBPE_like 163 247 - -
Ahy15g2775 284 PANTHER TRANSCRIPTION FACTOR BEE 1 6 282 - -
Ahy15g2775 284 MobiDBLite consensus disorder prediction 146 162 - -
Ahy15g2775 284 Gene3D - 168 239 IPR036638 GO:0046983
Ahy15g2775 284 MobiDBLite consensus disorder prediction 117 134 - -
Ahy15g2775 284 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 172 222 IPR011598 GO:0046983
Ahy15g2775 284 SMART finulus 178 228 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2775 Ahy-Chr15 145246491 145248267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2775 7 283 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 47.458 1.79e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy15g2775 HLH 0.00011 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2775 - - adu:107490384 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2775 15 145246491 145248267 Ahy15g2775 15 145246491 145248267 ECH