Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2772 ATGTCTTTTTCATCAAAGAGCAATAATAAAAACATTATTAGCTGCTCTAGTGAAGATGATAATAATAATAAGGATAATGAACTTAGAAGAGGACCTTGGACCCATGAAGAGGATGATCTTCTCAAAATGTGCATTGCCATTCATGGTGAAGGCAGATGGAATTTTCTGGCCAAATCTTCAGGGTTAAAAAGAACAGGGAAGAGTTGCAGATTAAGGTGGCTTAATTATCTAAAGCCAGATGTGAAAAGAGGAAATTTAACCCCACAAGAAAAGCTTTTGATTTTTGAACTCCACTCAAAGTGGGGCAACAGGTGGTCAAAAATTGCACAACAATTGCCTGGAAGGACAGATAATGAAATCAAGAACTTCTGGAGAACAAGAATCCAAAAACAAGTGAAGTATTTCAAGATTGACACATTATGGAGGACAAGATTTGTTGATGAATCAAAAGAATTATACCAAGAGCAAAACCAAAACCAAGCATTAATTATTCCAACAATGTCTCCTGATTGTGTCACTCAAATGCAGCAATATCCATCACTTATTGAAGAAGCAACACCAACACCAGCAAAAACTCAAATAATTCCATGTGAGAGACCTTCTTGTATGATGAATGGTGCAAGTTCAAATTGTGTGGATTACTCAGATTATGAAAACAACAACAACAATAATGGATCATCATGCATGTCCTTCACAGAGTCAACAAATATGGCAAACATGGTTCAGTTTGAGACTTTAGATAACATCACTAATGCATATGGCATGGATGCACTCAACATCGATATGGAATGCCAAGTGTCACAAAGCAATTGGCTAGACAAGGATTTTGTATGTACCATGTGGAACATGAACATGGATGAATTGTCACACTTTAGGAGTATACAAAATCAGTAA 894 0.3624 MSFSSKSNNKNIISCSSEDDNNNKDNELRRGPWTHEEDDLLKMCIAIHGEGRWNFLAKSSGLKRTGKSCRLRWLNYLKPDVKRGNLTPQEKLLIFELHSKWGNRWSKIAQQLPGRTDNEIKNFWRTRIQKQVKYFKIDTLWRTRFVDESKELYQEQNQNQALIIPTMSPDCVTQMQQYPSLIEEATPTPAKTQIIPCERPSCMMNGASSNCVDYSDYENNNNNNGSSCMSFTESTNMANMVQFETLDNITNAYGMDALNIDMECQVSQSNWLDKDFVCTMWNMNMDELSHFRSIQNQ* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2772 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 132 IPR017930 -
Ahy15g2772 297 PANTHER MYB DOMAIN PROTEIN 116 22 283 - -
Ahy15g2772 297 SUPERFAMILY Homeodomain-like 28 124 IPR009057 -
Ahy15g2772 297 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 22 283 IPR044676 GO:0003700|GO:0006355|GO:0043565
Ahy15g2772 297 CDD SANT 32 77 IPR001005 -
Ahy15g2772 297 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Ahy15g2772 297 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 25 81 IPR017930 -
Ahy15g2772 297 Pfam Myb-like DNA-binding domain 83 126 IPR001005 -
Ahy15g2772 297 Pfam Myb-like DNA-binding domain 30 77 IPR001005 -
Ahy15g2772 297 MobiDBLite consensus disorder prediction 1 19 - -
Ahy15g2772 297 MobiDBLite consensus disorder prediction 1 31 - -
Ahy15g2772 297 SMART sant 82 130 IPR001005 -
Ahy15g2772 297 SMART sant 29 79 IPR001005 -
Ahy15g2772 297 ProSiteProfiles Myb-like domain profile. 78 128 IPR001005 -
Ahy15g2772 297 Gene3D - 21 83 - -
Ahy15g2772 297 CDD SANT 87 126 IPR001005 -
Ahy15g2772 297 Gene3D - 86 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2772 Ahy-Chr15 145185887 145188054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2772 25 292 MYB Transcription Factor Family AT1G68320 42.321 1.34e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy15g2772 Myb_DNA-binding 3.80E-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2772 15 145185887 145188054 Ahy15g2772 15 145185887 145188054 ECH