LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy15g2755	ATGGAGTCATTTAACAGAGAAGCTAGTGGTGTGAGAGACACTGGTCCACTTCACAGTGTGAGAATAGCCTCCCCCTTTCGACAAGTGAGTGGTCCACTATATGCCACCAATGGAACTGGAGATATATTGCAGCAGAATATAGTTGTGACAGGAAACAATGTAGTGCAGAGCAATACAAGAACTTTTTCTGCTTTCCACAGAACAAGTCAACATCACTGGAATAACAACAGTGATAGGAGAAAAGAATACTTATTGATGTCCGGGCAATTGGGAATGTGTAATGATCCATGTTGTACTACCTGCCCTGCTTACTTAAAGGTTGCTCAGCATGAAAACTCAAGAATATCGAATACCTTTGGTCAAAAGTTTCATAACGATCATGATGGAGATTTCAAGGGTTTTACTAGAAAAGTTTTCTCTTTCTACTCTTCATGTATTCATGGTGTTGTCAACCCTCACACTAAAGTTGTACAACAATGGAAGATGATTCTAGCTACTTTTTGCATGGTTGCAGTTTTTCTAGATCCATTATTTTTCTTCTTATTCTATGTACAAAAGGATTTGAAGTGTATTGCTATTGACTGGAAACTTAATACGACCCTTGTTTTATTTAGAAGTTTAAATGATTTTATATATTTCTTGAACATTCTTCTCCAGTTTAGGTTGGCATATATTTCACCTGAGTCAACAATGCTTGGTGCAAGAGATTTAGTTGACCATCCAAAGAAAATTGCTCAACGTTACTTGCGTGGCTATTTTTTTCTGGACTTGTTTGTTATAATTCCTATACCTCAGATAATGATGTTGTTTGTTGTTCCAAACTACTTGGGTTCCTCAGGAATGAATTATACTAAGAATCTTCTGCGTGCGGCTATTCTTGTTCAGTATATCCCCAAATTATTGGGGTTTCTACCTCTGCTACGTGATCAGTCTCCAACAGGGTTCATATTTTCAACGGTCTGGGAAAGTTTCTTTATACATCTTCTCGTTTTTATGCTATCTGGACATGTTGTTGGGGCTAATTGGTACCTCTTTGGTCTACAGAGAGTTAATCAATGTTTGCGTGATGCCTGTCGTAATTCTAATATTACTGGATGCATTGAATTCATAGACTGTGGATACAGGCGTTTGTCAAACCAGACATCACATCATTGGAATAACAATGTGAATGCTACTGCCTGTTTTAGTTCCTTGCCTGCTGGTGCTTTTACTTTTGGGATCTACGCTAACGTTGCACCACTTGTTATACATAAAAACTACATCAAGAAATATGTATATGCACTGTTCTGGGGCTTTCAGCAAATCTGTACTCTTGCTGGTAATCAAACCCCAAGCTCTTTTGAGTGGGAAGTCCTGTTCGTGATGAGCATCATAGGATTAGGACTGTTCCATTTAGCGGTTCTCATTGGACACTTACAAAGCAGTAGTCAAGGTCTTGTACAGAGGAGAGTTGAAAACAAACTTAGAGAAAGTGCTGTTGAGGAATGGATGAGTGATTGCTGCTTACCAGAAGATCTAAAATGGAGAGTAAGACAGTCCGAAACGTATAATTGGGCTGCAACAAGAGGGGTTAAAGAAGAAATGCTTATGGAGAATATGTCAGAGGATCTCCAAAGAGACATTAGACGCCATCTCTTTAAATTTATCAAGAAAGTTCGAATTATTGCCTTGATGGATGAGCCCATCTTTGATGCCATTTGTGAGAGATTAAGGCGACGTGTATACACTAGAGGAAGTAATATATTGTGTCGTGGTGGTTTGGTCGAGAAGATAGTCTTTGTTCTGCATGGAAAACTAGAGAGCATTGAAGAAGATGGAACTAGAGTTTGCTTATTCAACGAGGATGCTTGTGGTGAAGAACTATTGATATGGTGTCTTGAAAATTCTTTAGTTAGCACAGATGATAAAAAATTGCCCCCTGAATGGAGGTTGCTTAGCAGTAGGACGGTAACATGCTTAACCGACGTCAAGGCCTTTTCACTTCGAGCTGTTGACCTTGAAGAAATAATAACCCGTTTCACAAGATTCTTGCAGAGTCCGAGGACGCTAGCAGCCATAAGGTATGAATCGCCTTATTGGAGATCCCTTGGAGCAAACCGAATTCAGGCTGCATGGAGAGACAAAAAGAATCGACTACGTGCTGCTTCACAAGCAAATTAG	2160	0.3944	MESFNREASGVRDTGPLHSVRIASPFRQVSGPLYATNGTGDILQQNIVVTGNNVVQSNTRTFSAFHRTSQHHWNNNSDRRKEYLLMSGQLGMCNDPCCTTCPAYLKVAQHENSRISNTFGQKFHNDHDGDFKGFTRKVFSFYSSCIHGVVNPHTKVVQQWKMILATFCMVAVFLDPLFFFLFYVQKDLKCIAIDWKLNTTLVLFRSLNDFIYFLNILLQFRLAYISPESTMLGARDLVDHPKKIAQRYLRGYFFLDLFVIIPIPQIMMLFVVPNYLGSSGMNYTKNLLRAAILVQYIPKLLGFLPLLRDQSPTGFIFSTVWESFFIHLLVFMLSGHVVGANWYLFGLQRVNQCLRDACRNSNITGCIEFIDCGYRRLSNQTSHHWNNNVNATACFSSLPAGAFTFGIYANVAPLVIHKNYIKKYVYALFWGFQQICTLAGNQTPSSFEWEVLFVMSIIGLGLFHLAVLIGHLQSSSQGLVQRRVENKLRESAVEEWMSDCCLPEDLKWRVRQSETYNWAATRGVKEEMLMENMSEDLQRDIRRHLFKFIKKVRIIALMDEPIFDAICERLRRRVYTRGSNILCRGGLVEKIVFVLHGKLESIEEDGTRVCLFNEDACGEELLIWCLENSLVSTDDKKLPPEWRLLSSRTVTCLTDVKAFSLRAVDLEEIITRFTRFLQSPRTLAAIRYESPYWRSLGANRIQAAWRDKKNRLRAASQAN*	720

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy15g2755	719	SUPERFAMILY	cAMP-binding domain-like	485	678	IPR018490	-
	Ahy15g2755	719	Gene3D	Helix hairpin bin	478	545	-	-
	Ahy15g2755	719	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	19	714	-	-
	Ahy15g2755	719	CDD	CAP_ED	554	678	IPR000595	-
	Ahy15g2755	719	PANTHER	NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED	19	714	-	-
	Ahy15g2755	719	SUPERFAMILY	Voltage-gated potassium channels	152	475	-	-
	Ahy15g2755	719	Gene3D	-	161	477	-	-
	Ahy15g2755	719	Gene3D	Jelly Rolls	552	675	IPR014710	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy15g2755	Ahy-Chr15	144783750	144794612	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy15g2755	1	632	Ion Channels	AT3G17700	52.038	0.0	626

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy15g2755	K05391		-	gsj:114390051	929.858

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