Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2754 ATGTCAAAACCTTTCTACTTGTTATGTGCATTATTCTCCACCATATTCACGACATGTTATGCTGATTCATCACCAATTTGTGCTTCTTCTGGTTGTGGTAATGGAGTTCCCATTAAGTACCCTTTCTGGAAACGTTCCGGCACCGCCGTCGGAGAAGTTTGCGGTTATCCGGATTTTGGTCTTGAATGTTCAAAAAAAGGCTACCCTATCCTCCAACTGGAAACTGACACATACTATGTTACAGACATAAACTATGTGAATCATTCAATCACACTTGTTGACATTGATGTGATGAATGATACATGTCCAAGGGCAAAGAACACCGTTTCCATAGGGAACATACCTTTGTCTTTCAGTAATTTGGATATGAACATCACTTTCTACTTCAATTGCAGTTCTCAGCCTTCAGTGGTTGGTGCCGTGCCTATCAAGTGTTTGATAAATGGTCAGGGGAAGAAGTCTTATGTGTTTGAGGTTGGAACGGATATTGGTGGTAGGACTTGGACTAACTCTTGTGATGCTGAGGTTATGGTGGCAGTGAAGCATGATCAGATCGAAAGTGGTGATTTGATCAATGGGTTTGGTGCAGCTATGAACAAAGGGTTTGTTCTTGATTGGAACAGAGCTGTGGATTGTGCTGAGTGCGAGCTTTCTGATGGGTATTGTGCATATAATGGAACTACTAGGCAAACCATGTGCATATGCAAAGATAGCATAATTGTTGCCGAAAGCTGTAAAAAAGCTGCAGGTAAACGCTGGACCAGACTAAAGAAAGTCATTATTGGTGCTACAACAGTTGCAGTAATTGCAGGATTGTTGAGTATTTGTTACCTTACATACAAGTTACCAAGATGGCGAGAAAAATATAGCTTTCTGACAAAAGGTAACCAAGATATTGAAACTTTCTTAAAAAATCATGGCGTGTTAACTATAAAAAGATATAAATTCTCTGATGTGAAAAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATACAAGGGAAAGTTATCCGATGGTTCTAATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTAGAGAGTTTATCAATGAAGTAGCTAGCATTAGTAGAACTTCACATGTTAATGTTGTCACCCTTTTTGGATTCTGCTTTGAAGGCCGCAAGAAAGTTCTTATTTATGAATTTATATCAAATGGTTCCCTTGACAAGTATATTTATAGAAAGGAAGGAGTTGAAACTACTGCATTGTTGAGTTGGGATAGGCTGTATCAAATTGCCAAAGGGATAGCTAGGGGGTTAGAGTACTTGCATAGAGGATGCAACACTCAAATTTTACATTTTGACATAAAGCCACATAATATTCTTTTGGATGAAAATTTTTGTCCTAAGATATCAGATTTTGGACTAGCAAAACTTTGTCCTGGGAAGGAAAGTCTTATTTCGATGTCGGATGCTAGAGGAACAATAGGGTATATAGCTCCAGAAGTATGGAATAGACATTTCGGCAAAGCTTCTCATAAATCTGATGTTTATAGTTACGGAATGATGCTTCTTGATATAGTGGGAGGAAAGAAGAACATTAATGTAGAAGGGAGTCAAACAAGTGAGATATATTTCCCTGATTGGATATACAAAAGGCTTGAACAAGGCACTCAATTAGGGCCTGAAGATGGAGTGGTGGCAATAGAGGAAAATGAATTGGTTAAGAAAATGACGATTGTGGGTTTATGGTGTATTCAAACAATTCCAAATGATAGACCTACAATGAGTAAAGTTGTAGAAATGTTAGAAGGCAGCATAGATTCCATAAAAATGCCACCAAGACCTGCTCTGTCTTCTCCTGTAAGATCGATTGCAGAATCTTCTACTTTGTTGAATTAG 1890 0.3831 MSKPFYLLCALFSTIFTTCYADSSPICASSGCGNGVPIKYPFWKRSGTAVGEVCGYPDFGLECSKKGYPILQLETDTYYVTDINYVNHSITLVDIDVMNDTCPRAKNTVSIGNIPLSFSNLDMNITFYFNCSSQPSVVGAVPIKCLINGQGKKSYVFEVGTDIGGRTWTNSCDAEVMVAVKHDQIESGDLINGFGAAMNKGFVLDWNRAVDCAECELSDGYCAYNGTTRQTMCICKDSIIVAESCKKAAGKRWTRLKKVIIGATTVAVIAGLLSICYLTYKLPRWREKYSFLTKGNQDIETFLKNHGVLTIKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSDGSNVAVKMLNPSKGNGREFINEVASISRTSHVNVVTLFGFCFEGRKKVLIYEFISNGSLDKYIYRKEGVETTALLSWDRLYQIAKGIARGLEYLHRGCNTQILHFDIKPHNILLDENFCPKISDFGLAKLCPGKESLISMSDARGTIGYIAPEVWNRHFGKASHKSDVYSYGMMLLDIVGGKKNINVEGSQTSEIYFPDWIYKRLEQGTQLGPEDGVVAIEENELVKKMTIVGLWCIQTIPNDRPTMSKVVEMLEGSIDSIKMPPRPALSSPVRSIAESSTLLN* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2754 629 Gene3D Phosphorylase Kinase; domain 1 298 398 - -
Ahy15g2754 629 CDD STKc_IRAK 330 601 - -
Ahy15g2754 629 Pfam Protein kinase domain 327 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2754 629 Gene3D Transferase(Phosphotransferase) domain 1 399 613 - -
Ahy15g2754 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Ahy15g2754 629 PANTHER - 29 626 - -
Ahy15g2754 629 SMART serkin_6 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2754 629 SUPERFAMILY Protein kinase-like (PK-like) 306 600 IPR011009 -
Ahy15g2754 629 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Ahy15g2754 629 ProSiteProfiles Protein kinase domain profile. 324 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2754 629 Pfam Wall-associated receptor kinase C-terminal 150 237 IPR032872 -
Ahy15g2754 629 Pfam Wall-associated receptor kinase galacturonan-binding 27 94 IPR025287 GO:0030247
Ahy15g2754 629 PANTHER RUST RESISTANCE KINASE LR10-RELATED 29 626 IPR045874 GO:0004672
Ahy15g2754 629 MobiDBLite consensus disorder prediction 610 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2754 Ahy-Chr15 144768332 144771506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2754 32 627 Receptor kinase-like Gene Family AT5G38260 40.422 1.28e-147 440
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy15g2754 Pkinase 1.70E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2754 - - gmx:100796618 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2754 15 144768332 144771506 Ahy5g2502 5 100046221 100049954 hybridization
Ahy15g2754 15 144768332 144771506 Ahy13g2131 13 39829581 39833120 PCT
Ahy15g2754 15 144768332 144771506 Ahy3g1835 3 37882638 37886205 PCT