Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2748 ATGGGATTTCTTTTAAACTGGACTTCACCTGATTGCCAATACTGTGAGAAAAGTGGTGGACGGTGTGGATTTGATGGTTATCAGTTTCTCTGTTTCTGCAAGGATAAGTCATACCTGAAAAGTTGTGGTGATGATGCAATACATCTCCGGACATGGATAGTCATTGTTATAGGTGCTACAGCAGCTGCAGTAATTGTAGGATTGTTGAGTATTTGTTGTTTTACCTACATGTCACCAGCATCGCAAGAAAAATCCTGCTTTCCAACAAAGGGTAACCAAGATATTGAAACTTTCTTAAAAAATCATGGAGTGTTAACTATAAAAAGATATAAATTCTCTGATGTGAAGAAAATGACCAACTCCTTCAAAGTTAAACTAGGACAAGGTGGTTTTGGTGTTGTATATAAAGGAAAGTTATCCAATGATTCCGATGTGGCAGTCAAAATGTTGAATCCATCCAAAGGAAATGGTGAAGAATTTATTAACGAGGTAGCTAGCATTAGTAGAACTTCTCATGTTAATGTTGTCGCCCTTCTTGGATTTTGCTTAGAAGGTCACAAGAAAGTTCTCATCTATGAATTTATGTCCAATGGTTCCCTTGACAATTTTATTTACAAAAAGAACCCTAAGAATACACCACTCTTGAGTTGGGATAATTTATATCAAATTTCCATAGGGATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCTTATTTTACATTTTGACATAAAACCACATAATATTCTTTTGGATGAAAACTTTTGTCCTAAGATATCAGATTTTGGACTAGCAAAGCTTTGTCCTAGAAAAGAAAGTCATATTTCAATGTCCGAAACTAGAGGAACAATAGGGTACATAGCTCCAGAAGTGTGGAACAGACAATTCGGTAGAGTTTCACATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAACATCCCTGCAAAGACAAGTCACACAAGTGAGATGTACTTCCCTGATTGGATATACAAAAGGCTTGATCAAGGAACTCAACTGGGACCTGATGATGATGGGGAAGTGGCCATAGAGGAAAATGATGTTGTTAAGAAAATGACAATGGTGGGTTTATGGTGCATTCAACCAATTCCAAATGACAGACCAACAATGAGTAGAGTTGTAGAAATGTTGGAGGGCAGCATGAATTCCCTGGAAATGCCACCAAGACCTGTCCTGTCTTCAATAAGAGTGGTAGTAGAATCTTCTTCTAATGTTGTATCGTTGGTAGAATCTTCTTCTGTTGTATCAGTTGTAGAATCTTCTACTAGTGTAACTTAG 1332 0.3709 MGFLLNWTSPDCQYCEKSGGRCGFDGYQFLCFCKDKSYLKSCGDDAIHLRTWIVIVIGATAAAVIVGLLSICCFTYMSPASQEKSCFPTKGNQDIETFLKNHGVLTIKRYKFSDVKKMTNSFKVKLGQGGFGVVYKGKLSNDSDVAVKMLNPSKGNGEEFINEVASISRTSHVNVVALLGFCLEGHKKVLIYEFMSNGSLDNFIYKKNPKNTPLLSWDNLYQISIGIARGLEYLHRGCNILILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISMSETRGTIGYIAPEVWNRQFGRVSHKSDVYSYGMMLLEMVGMKENIPAKTSHTSEMYFPDWIYKRLDQGTQLGPDDDGEVAIEENDVVKKMTMVGLWCIQPIPNDRPTMSRVVEMLEGSMNSLEMPPRPVLSSIRVVVESSSNVVSLVESSSVVSVVESSTSVT* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2748 443 ProSiteProfiles Protein kinase domain profile. 120 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2748 443 Gene3D Transferase(Phosphotransferase) domain 1 195 404 - -
Ahy15g2748 443 SUPERFAMILY Protein kinase-like (PK-like) 102 396 IPR011009 -
Ahy15g2748 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Ahy15g2748 443 Gene3D Phosphorylase Kinase; domain 1 86 194 - -
Ahy15g2748 443 ProSitePatterns Protein kinases ATP-binding region signature. 126 148 IPR017441 GO:0005524
Ahy15g2748 443 Pfam Protein tyrosine and serine/threonine kinase 122 395 IPR001245 GO:0004672|GO:0006468
Ahy15g2748 443 SMART serkin_6 120 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2748 443 Pfam Wall-associated receptor kinase C-terminal 2 36 IPR032872 -
Ahy15g2748 443 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 47 419 - -
Ahy15g2748 443 PANTHER RUST RESISTANCE KINASE LR10-RELATED 47 419 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2748 Ahy-Chr15 144648098 144651125 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2748 1 436 Receptor kinase-like Gene Family AT5G38260 47.727 1.03e-134 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy15g2748 PK_Tyr_Ser-Thr 7.20E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2748 - - ahf:112751085 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2748 15 144648098 144651125 Ahy15g2748 15 144648098 144651125 ECH
Ahy15g2748 15 144648098 144651125 Ahy5g2506 5 100122425 100124950 hybridization