Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2746 ATGGTGCTTGCATCCATAGGGATCATCGTGTCTCTGTTGCTGATGACCGCTTTGCCACCATCCCTGTCTCAATCACCACCTTCCGATAATCACTCTCTGTGCAGCCATCCATATCAATGTGGCACACTAGAAGCATACTACCCTTTCTGGGGGAAAGAACGACCCCGCCAGTGTGGCGGCGATGACAAACTCCAGCTTTTCTGCACGGAGGAGCAGTATACTTACATTGAAATGGGCTCCAAACGATTCGGTGTGGCGAATGATGATGACCATGACAACGGGGTGAAATTGCTGCCCTATACAGTGGCTGACAGAGGACCTGATGTTTGCTCTTGGGATTCCGGTTATTCTCTGAATTACCCTCTCTTAATATACAACCAAAAAGTCCACAACATCACCATATTCTATAATTGCACCTACTCCTATCCAGATAATCATAGCCTAGGGTGCGGTGATGTTGTGTATTACAATGGTACGGAAAAAGAGGTGCTGGGAAGTCATCAAGAGCTTAAGAATTGCCATCATCGTATCCAAGTGGCTGCTGAGGCTGTTGTGTTGAACGGGGTCGGAGTTGATGATGCTTCTGCTCTGCATTTCGGTAAAGGTGTGTCGGTGAACTCTACTTATTCTCAAGATTGTATGAGATGCTTGGATAGTAAAGGAACCTGCGGGAGGAACGATACGCATGCATTTACCTGCTATTGCCCTAATGGATCTAACGCGCTCCAATGTTCTCATCGTAAGAGAAATCACTGGAGATGGATAGTTATCGGTACAGTCGCTGCTTCTGTGGTTGGAGTGCTAGCCCTTGCCATGGCCTTTGGAGGGAAACTTCACTGTTCTCCTGCTGCCGCATGGCACTACTCTAGTTCAGGTGTAACAATTACAGCAATTGCAGTTATCCGAGTGTTGGTTAGTTGTTTTACGTGTAAGTTGTTAAGGTTAAAGAGTAATCGAGATATTGAGACCTTCTTAAAAAATCATAGAGTCTTGACTCTAAAGAGATATAAATTCTCGGATGTGAAGAAAATGACCAACTCTTTCAAAGTTAAGCTAGGACAAGGTGGTTTTGGTGCTGTGTACAAGGGAAAGTTACGCAACGGTTCCGATGTTGCCGTCAAAATTTTGAATCAATCCAAAGGAAATGGTGAAGATTTTATTAACGAGGTAGCTAGTATTAGTAGAACTTCTCATGTTAATGTTGTCACCCTTCTTGGATTTTGCTTAGATGGCCACAAAAAAGTTCTTATCTATGAGTTTATGTCTAATGGTTCACTTGACAAGTTTATTTACAAAAAAGAACCTAAAAATACTCCACTCTTGAGTTGGGATAATTTGTATCAAATTTCCATAGGAATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCGAATTTTACATTTTGACATAAAACCACATAACATCCTTTTGGATGAAAATTTTTGTCCTAAGATATCAGATTTCGGACTAGCAAAGCTTTGTCCTAGAAAAGAAAGTCATATTTCCATGTCCGAAACCAGAGGAACAATAGGGTACATAGCTCCAGAAATGTGGAACAGATATTTTGATAGAGTTTCACATAAATCTGATGTTTATAGCTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAAGAACATAATTGCAGAGACAAGTCAAACAAGCGAGATGTACTTCCCTGATTGGATATACAAAAGTCTTGAACAAGGCACTCAGGTAGGACCTAAAGACGAAGAGTTATCAATGGAGGAAAATGATGTTGTCAAGAAAATGACAGTGGTGGGTTTATGGTGCATTCAACCAATTCCAAGTGATAGGCCAACAATGAGTAAAGTTGTAGAAATGTTGGAAGGCAGTATGAATTCCCTGGAAATTCCACCAAGAGGTCTGTCTTCTCCAATAAGAGTGGTGATAGAATCTTCTACGGTTGTACCGTTGGTAGAATCTTCTTCTATTGTATCCGTTGTAGAATCTTCTACTGGTGTAGAATCTTCTATTGTATCAAACACACATTATAACCTGAATGTTTTCACTGAAAACAAAAATGTCAGCTAG 2070 0.4097 MVLASIGIIVSLLLMTALPPSLSQSPPSDNHSLCSHPYQCGTLEAYYPFWGKERPRQCGGDDKLQLFCTEEQYTYIEMGSKRFGVANDDDHDNGVKLLPYTVADRGPDVCSWDSGYSLNYPLLIYNQKVHNITIFYNCTYSYPDNHSLGCGDVVYYNGTEKEVLGSHQELKNCHHRIQVAAEAVVLNGVGVDDASALHFGKGVSVNSTYSQDCMRCLDSKGTCGRNDTHAFTCYCPNGSNALQCSHRKRNHWRWIVIGTVAASVVGVLALAMAFGGKLHCSPAAAWHYSSSGVTITAIAVIRVLVSCFTCKLLRLKSNRDIETFLKNHRVLTLKRYKFSDVKKMTNSFKVKLGQGGFGAVYKGKLRNGSDVAVKILNQSKGNGEDFINEVASISRTSHVNVVTLLGFCLDGHKKVLIYEFMSNGSLDKFIYKKEPKNTPLLSWDNLYQISIGIARGLEYLHRGCNIRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHISMSETRGTIGYIAPEMWNRYFDRVSHKSDVYSYGMMLLEMVGMKEKNIIAETSQTSEMYFPDWIYKSLEQGTQVGPKDEELSMEENDVVKKMTVVGLWCIQPIPSDRPTMSKVVEMLEGSMNSLEIPPRGLSSPIRVVIESSTVVPLVESSSIVSVVESSTGVESSIVSNTHYNLNVFTENKNVS* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2746 689 PANTHER RUST RESISTANCE KINASE LR10-RELATED 8 647 IPR045874 GO:0004672
Ahy15g2746 689 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE, PROTEIN KINASE RLK-PELLE-LRK10L-2 FAMILY-RELATED 8 647 - -
Ahy15g2746 689 Pfam Protein tyrosine and serine/threonine kinase 348 621 IPR001245 GO:0004672|GO:0006468
Ahy15g2746 689 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Ahy15g2746 689 Pfam Wall-associated receptor kinase C-terminal 161 237 IPR032872 -
Ahy15g2746 689 Gene3D Phosphorylase Kinase; domain 1 320 420 - -
Ahy15g2746 689 Gene3D Transferase(Phosphotransferase) domain 1 421 630 - -
Ahy15g2746 689 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2746 689 SMART serkin_6 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2746 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Ahy15g2746 689 SUPERFAMILY Protein kinase-like (PK-like) 327 622 IPR011009 -
Ahy15g2746 689 Pfam Wall-associated receptor kinase galacturonan-binding 34 87 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2746 Ahy-Chr15 144574419 144578369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2746 30 647 Receptor kinase-like Gene Family AT1G66910 40.212 4.94e-138 418
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Ahy15g2746 PK_Tyr_Ser-Thr 2.80E-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2746 - - ahf:112751085 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2746 15 144574419 144578369 Ahy5g2509 5 100147698 100151540 hybridization