Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2743 ATGAGGTGTGTCCCGTTTAGCTGGTTTCAATGCTACACTACAAGGAAGAACCAACCTCAACAGATTTCAAACCACCCTCAACAATTTTCTTCAGATTTTGGGTTCCAATTTCATACATTCTCCTATGAAGAACTTTTAATAGCCACCAAGCATTTTGCTTCCTCTGGGATACTCGGAAAGGGAAGCTTTGGCATAGTATATCATGGTAAACTTCAAGATGGGAGACAGATTGCAGTCAAATCCTTGCGCGAAAACAATGACAAGAAAGTTCAACAGTTTGTCAATGAAATAGAAGTCTTAAGCAAATTGAGCCATCAAAACCTTGTCCCATTTTATGGCTACTGTCACCGCCATGACCATGAATTCATGCTAGTATTTGAATTTGTTTCCAATGGAACTCTGGCCGATCATCTTCATGGAAAGCGTAAGAAACAAGGCACTCTAGTACCCTGGCATACCAGATTGAACATAGCAATTGAGGCTGCAAGTGCATTGGCTTATCTTCATAATTCAGGAATTATTCACCGCGACATAAAATCCTCCAACATTCTTTTGGATGATAACTTGTGTGTTAAGGTAGCCGATTTTGGCCTTTCGCGCACGCTTCCTTTGGTTGTTTCAACTTCAAAAGAGGCTGCTACTTTTGCTTCTCATGCCTCAACTGCTCCACAAGGAACAAATGGATATATAGACCCTGACTATTTTCAATTTCACAGGGTTTGTGACAAGAGTGATACTTATAGCTTTGGCGTGGTTTTAGCCGAGATTATATCTTCGTTGCCAGCGGTTGATGATACATGGAATCCATATGAGGTACCATTACTGTCTCACCTTGCCATGAACAAAATCCAAAATGAAGCATTGCACGAGTTGGTGGATCCATGCCTTGGTTTTCAACCAGACAATGAGATTGGAGAATCTATAACTGCTGTGGCTGAGTTGGCATTTCAGTGCCTGCAATGTCCTAAGGAACTAAGGCCATCTATGAAGCAGGTGCTAGAGACTCTGCAGGGTATAAAGAAGGGAATATGGGGATTTCACCAAATAACATAG 1053 0.415 MRCVPFSWFQCYTTRKNQPQQISNHPQQFSSDFGFQFHTFSYEELLIATKHFASSGILGKGSFGIVYHGKLQDGRQIAVKSLRENNDKKVQQFVNEIEVLSKLSHQNLVPFYGYCHRHDHEFMLVFEFVSNGTLADHLHGKRKKQGTLVPWHTRLNIAIEAASALAYLHNSGIIHRDIKSSNILLDDNLCVKVADFGLSRTLPLVVSTSKEAATFASHASTAPQGTNGYIDPDYFQFHRVCDKSDTYSFGVVLAEIISSLPAVDDTWNPYEVPLLSHLAMNKIQNEALHELVDPCLGFQPDNEIGESITAVAELAFQCLQCPKELRPSMKQVLETLQGIKKGIWGFHQIT* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2743 350 Gene3D Phosphorylase Kinase; domain 1 23 128 - -
Ahy15g2743 350 PIRSF ILK 36 348 - -
Ahy15g2743 350 CDD STKc_IRAK 58 339 - -
Ahy15g2743 350 Gene3D Transferase(Phosphotransferase) domain 1 129 343 - -
Ahy15g2743 350 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Ahy15g2743 350 SMART serkin_6 52 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2743 350 Pfam Protein tyrosine and serine/threonine kinase 57 336 IPR001245 GO:0004672|GO:0006468
Ahy15g2743 350 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 341 - -
Ahy15g2743 350 ProSitePatterns Protein kinases ATP-binding region signature. 58 80 IPR017441 GO:0005524
Ahy15g2743 350 ProSiteProfiles Protein kinase domain profile. 52 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2743 350 SUPERFAMILY Protein kinase-like (PK-like) 28 336 IPR011009 -
Ahy15g2743 350 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 341 IPR044652 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2743 Ahy-Chr15 144447013 144449541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2743 28 340 Receptor kinase-like Gene Family AT1G25390 53.355 3.26e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy15g2743 PK_Tyr_Ser-Thr 1.70E-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2743 - - adu:107490705 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2743 15 144447013 144449541 Ahy5g2513 5 100204121 100208767 hybridization