Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2645 ATGGTAATGATTGCTTTCTATTGGGCACACTACAAACGATGTATTCTACTCTCCAAGAGCTGGTTGATATTTCTGCCAAAAGTAAAGCACCAAGAAATGCTGTCACTAGGGAAGAATCTGCTGAAATTGCGAAAGAAAAGTTTGTTACTTAATCAGGGAAATCAAGGTTACAAAGACAAGCAGTGGCAGAAAGCCATTGGATTTTATTTGGAAACCATAAAACTAAGCAGCAACAATGCAACATACTACAGTAATAGGTCCCAAGCTTATCTAGAACTTGGAAGTTACCTCCAAGCTGAGGCAGATTGTACAAAAGCAATTAACCTTGACAAAAAGAATGTCAAAGTGTATTTTAGAAGAGGTAGAGCTAGAGAGATGCTTGGCTACTATACCGATGCAATTGATGATTTTCAACATGCCTTGGTACTTGAACTAACCAACAAAATGGCATCCTCCGCCGCCGAAAGATTGAGGAAACTATTCCAGTAG 489 0.3906 MVMIAFYWAHYKRCILLSKSWLIFLPKVKHQEMLSLGKNLLKLRKKSLLLNQGNQGYKDKQWQKAIGFYLETIKLSSNNATYYSNRSQAYLELGSYLQAEADCTKAINLDKKNVKVYFRRGRAREMLGYYTDAIDDFQHALVLELTNKMASSAAERLRKLFQ* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2645 162 PANTHER AMIDASE 1 51 162 - -
Ahy15g2645 162 Gene3D Tetratricopeptide repeat domain 29 162 IPR011990 GO:0005515
Ahy15g2645 162 ProSiteProfiles TPR repeat profile. 80 113 IPR019734 GO:0005515
Ahy15g2645 162 ProSiteProfiles TPR repeat profile. 114 147 IPR019734 GO:0005515
Ahy15g2645 162 SMART tpr_5 114 147 IPR019734 GO:0005515
Ahy15g2645 162 SMART tpr_5 80 113 IPR019734 GO:0005515
Ahy15g2645 162 SMART tpr_5 46 79 IPR019734 GO:0005515
Ahy15g2645 162 PANTHER OUTER ENVELOPE PROTEIN 64, CHLOROPLASTIC 51 162 - -
Ahy15g2645 162 SUPERFAMILY TPR-like 48 150 IPR011990 GO:0005515
Ahy15g2645 162 Pfam Tetratricopeptide repeat 80 113 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2645 Ahy-Chr15 142344094 142349171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2645 49 143 U-box Gene Family AT3G07370 32.632 1.39e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2645 - - ahf:112802326 287.73