Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2588 ATGGTCCTCGATACTGCCTGAGGAATAAACCATTTGCACAACTGCACTCCAGTAATTGTACACCGTGATTTTAAGTCACTAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGTTATGTGGTTTTGGCTTATCAAGAATGAAGCACAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGTGCCTGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGCGATGTTTATAGCTTTGGAGTCACATTATGGGAGCTCTCTACTTTGCAGCAGCCCTGGGGTGGAATGAATCGGATGCAAGTTGTGGGTGCTGTCGGTTTCCAGCATTGTTGTCTTGTCATTACAGATGATATGGAGCCTGCTATCACGGATATTATCAAGCAATGCTGGCAGAGCTTCGGAAACGGCTTCACACACCGTGTCTAG 441 0.4354 MVLDTA*GINHLHNCTPVIVHRDFKSLNLLVDKNWVVKLCGFGLSRMKHSTFLSSRSTAGTAEWMVPEVLRNEPSNEKCDVYSFGVTLWELSTLQQPWGGMNRMQVVGAVGFQHCCLVITDDMEPAITDIIKQCWQSFGNGFTHRV* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2588 145 SUPERFAMILY Protein kinase-like (PK-like) 6 135 IPR011009 -
Ahy15g2588 145 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 136 - -
Ahy15g2588 145 Gene3D Transferase(Phosphotransferase) domain 1 5 138 - -
Ahy15g2588 145 Pfam Protein tyrosine and serine/threonine kinase 6 136 IPR001245 GO:0004672|GO:0006468
Ahy15g2588 145 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 136 - -
Ahy15g2588 145 ProSiteProfiles Protein kinase domain profile. 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy15g2588 145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Ahy15g2588 145 SMART serkin_6 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2588 Ahy-Chr15 141131856 141139395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2588 1 136 MAP Kinase Kinase Kinase AT1G73660 75.182 1.01e-71 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Ahy15g2588 PK_Tyr_Ser-Thr 3.30E-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2588 - - gmx:100816332 243.432