Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2573 ATGGAGAGAGATTTTTTTGGTTTGAGCTCCAAAAGTGATGCAGGGACTACTATCAAAGACGATGCAGCAGTGAGGGGTTCAGGAATGCAGTGGACATTCTCAAACAAAGTCTCAGCCATTCCTCAGTACTTGTCCTTCAAGACGACACTGGAAGATCAGAGAAAGACAATTATGGATCCCCTAGCTTCATCTGGATATATGACCATATCAACTAAGGATGCTTATGACACTGACCAGAAACCATTGTTTAGTGTGGTCCAGAGGAATTTATCCATAGGAAAGCAAGCCGGAAACAACATTGGAATGACAGTGTATCCACCGCCATGTTCTGGTTCACATTTAGCTAGCCAACAACAGGAATCAAGAATATTTTCACTTTCCAACCAAACAAATAAAGTAAGTCCTGTTCTTCAATCTAACCTTGCTACTACTACCGGACATAGCATGGTTGCTTCAGTTATAAAACCACAAGCACTCGGTTCCAAATCAACCAGCACACCTGTATCTGCTCTTCCATCTGCGAGTTCCATTGTTGGAACTACCGAGTTAAGGAATTGTTCCAAGTCTTCTGGGACACCTACTCAGCTGACCATTTTCTATGCCGGTTCAGTATGTGTTTATGATGACATATCTCCTGAGAAGGCCCAGGCTATCATGTTACTTGCTGGAAATGGCTCTGCTCTAAATCAGAACAACACAGTTTCTACAACTAAATTGCAGCCAGCAATGTCTGTTCCCTCCAAAGATAATGGTTTCATTGTAGGCATGCCAATTCCTCTTCCATTGACTTCTCTCACCGTTTCTCGTCCTGGAGGAGCGTCGGTGGCAGTTGGATCTTCGACTACCTCTACCAACAATTTGGAATCTCCTAATGTTGTTTCAATAAGATCTGCATCTCAAAAAATGGTTAACACAGTAGGGTTGCCTCAGGCACGCAAAGCATCGTTGGCTCGGTTCTTGGAGAAGCGAAAGGAAAGGGTTATGAGCACATCTCCCTACACTTTAAGCAAGAAATCTTCCCCTGAAAGCAGCAATCCTGGATCAGATACTATTAGTCTTTCCATGAACTCCTCCGGTTCCTGTTCGCTACCAGCCATTAACTAA 1104 0.4357 MERDFFGLSSKSDAGTTIKDDAAVRGSGMQWTFSNKVSAIPQYLSFKTTLEDQRKTIMDPLASSGYMTISTKDAYDTDQKPLFSVVQRNLSIGKQAGNNIGMTVYPPPCSGSHLASQQQESRIFSLSNQTNKVSPVLQSNLATTTGHSMVASVIKPQALGSKSTSTPVSALPSASSIVGTTELRNCSKSSGTPTQLTIFYAGSVCVYDDISPEKAQAIMLLAGNGSALNQNNTVSTTKLQPAMSVPSKDNGFIVGMPIPLPLTSLTVSRPGGASVAVGSSTTSTNNLESPNVVSIRSASQKMVNTVGLPQARKASLARFLEKRKERVMSTSPYTLSKKSSPESSNPGSDTISLSMNSSGSCSLPAIN* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2573 367 MobiDBLite consensus disorder prediction 329 367 - -
Ahy15g2573 367 ProSiteProfiles Tify domain profile. 189 224 IPR010399 -
Ahy15g2573 367 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 29 259 - -
Ahy15g2573 367 MobiDBLite consensus disorder prediction 328 367 - -
Ahy15g2573 367 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 256 367 IPR040390 -
Ahy15g2573 367 PANTHER JASMONATE ZIM-DOMAIN PROTEIN 256 367 - -
Ahy15g2573 367 Pfam tify domain 192 223 IPR010399 -
Ahy15g2573 367 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 29 259 IPR040390 -
Ahy15g2573 367 SMART tify_2 189 224 IPR010399 -
Ahy15g2573 367 Pfam Jas motif 309 333 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2573 Ahy-Chr15 140852747 140857941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2573 29 351 Tify Gene Family AT3G17860 40.176 8.13e-54 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy15g2573 tify 3.80E-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2573 K13464 - gmx:100807288 417.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2573 15 140852747 140857941 Ahy5g2621 5 102475923 102481093 hybridization