Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2568 ATGCCATTGATAAACACATATTCATCACTACCCACATATTCCTTCTCCTCCAATGCACCATCACCTTCAACTCTTGCTGTTGCTACCTTGGGATTCTTCAGCACCACCGCCACACCTTCTAAGTTCCTCCGCAAAACAACAAGCCATAGTCACATCCCAAGTTTCGGTTTTCCCGCAACCAGGAACACCCCTTTTTCCCGTTATGCTTCGACCATCAGAGCCAAAGCTGGAACCAGCGATTACTATTCCGTCTTGAATGTTAGCCGCAATGCTACTCTTCAAGAAATCAAGGCCTCCTATAGGAAGCTAGCTCGCAAGTACCATCCAGACAAACGTCCTGGGGCAGAGGAGAAGTTCAAGGAAATAAGTGCTGCATATGAGGTCCTATCAGATGATGAGAAAAGATCTTTATATGACCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGGGTCAGCCAGTGCTTCTGGGGTTGATCCGTTTGATTTATTTGACGCATTCTTTGGCCGCACTGATGGAAATGGAATGTTTGGAGAAAGTGATGAAGGGGGCATGAACTTCAGTTTTAGAAGCAATAGAAGCCGTGGCCTTGATATTCGGCATGATCTTTATTTGAGCTTTGAAGAATCAATTTTTGGAGTACGGAGGGAGATTGAAGTTTCTTGTTTTGAGCCATGTAATGATTGTGATGGTACAGGAGCTAAATCAAGGAATTGCATTAAAATATGTACAAATTGTGATGGCAGAGGAGGAGAAATGAAAAGTCAGAAAACACCCTTTGGAATCATGTCTCAGGTTTCTACCTGCTCTAAGTGCGGTGGTATTGGCAAGATAATCACTGATCATTGTCGAAGGTGTGAAGGTAGTGGTCAGGTGAAATCTAAACGAACAATGGAAGTGGTCATTCCTCCTGGTGCCAGTGATGGAGACACAACACAAATTCGAGGGGAAGGGAATTTTGATTCAAGGAGGCATATAAGCGGGGATCTGTTTGTAGTTCTCCATGTAGATGAAAAGCAGGGTATTTGGAGAGAGGGTCTTCATTTGTACTCAAAGATTAATATTGACTTTACAGATGCAATACTGGGATCTGTTAAAAAGGTAGAAACTGTTGAAGGCTTAAGGGATCTCCAGATTCCATCTGGGGTTCAGCCTGGAGAGGCAGTAAAGTTGTCACGTTTGGGAGTTCCAGACATGAATAGACCATCTTTTCGAGGCGATCATTACTTCATTGTGAATGTTCTGATTCCTAAAAATATCAGTGCTACCGAACGCGTGCTTGTTGAACAGTTAGCCTCACTAAGAGCATCTAAATATGATTCATTGTCTTCTAAGGACACTGGGATATCCCAAGGAAAATTCAAAGAATTCAATATGGATCCAAAATATCAAGATTCAAGCAAGCGAACTAAACATGTTGGTTCTCTGTGGACATCAATTCAGAATTTCTTAAGGAGAGGACAGTCTGAAGAGAAGTTTGCATCAATTAGCTTGGATACATCGATGTCATATTGTAGATTCAGCCACCAAAATTATTCAGTCCTAGATTCCTTTGTTGTTTTCTTAATAATTTGTCTTTTAGCATCCATTGCAAACTCTAAGTATTCATTATTTAGGAAAAGAACCCAGTCCCTCATAAGAGAGCAGAGTGAGAATAATTGA 1665 0.4162 MPLINTYSSLPTYSFSSNAPSPSTLAVATLGFFSTTATPSKFLRKTTSHSHIPSFGFPATRNTPFSRYASTIRAKAGTSDYYSVLNVSRNATLQEIKASYRKLARKYHPDKRPGAEEKFKEISAAYEVLSDDEKRSLYDRFGESGLQGENGGSASASGVDPFDLFDAFFGRTDGNGMFGESDEGGMNFSFRSNRSRGLDIRHDLYLSFEESIFGVRREIEVSCFEPCNDCDGTGAKSRNCIKICTNCDGRGGEMKSQKTPFGIMSQVSTCSKCGGIGKIITDHCRRCEGSGQVKSKRTMEVVIPPGASDGDTTQIRGEGNFDSRRHISGDLFVVLHVDEKQGIWREGLHLYSKINIDFTDAILGSVKKVETVEGLRDLQIPSGVQPGEAVKLSRLGVPDMNRPSFRGDHYFIVNVLIPKNISATERVLVEQLASLRASKYDSLSSKDTGISQGKFKEFNMDPKYQDSSKRTKHVGSLWTSIQNFLRRGQSEEKFASISLDTSMSYCRFSHQNYSVLDSFVVFLIICLLASIANSKYSLFRKRTQSLIREQSENN* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2568 554 Gene3D - 227 291 - -
Ahy15g2568 554 SUPERFAMILY HSP40/DnaJ peptide-binding domain 194 350 IPR008971 GO:0006457|GO:0051082
Ahy15g2568 554 SUPERFAMILY Chaperone J-domain 77 179 IPR036869 -
Ahy15g2568 554 ProSitePatterns Nt-dnaJ domain signature. 119 138 IPR018253 -
Ahy15g2568 554 Gene3D - 344 435 - -
Ahy15g2568 554 CDD DnaJ 80 131 IPR001623 -
Ahy15g2568 554 Pfam DnaJ C terminal domain 200 418 IPR002939 -
Ahy15g2568 554 SUPERFAMILY HSP40/DnaJ peptide-binding domain 345 426 IPR008971 GO:0006457|GO:0051082
Ahy15g2568 554 SMART dnaj_3 79 134 IPR001623 -
Ahy15g2568 554 Gene3D - 197 333 - -
Ahy15g2568 554 Gene3D DnaJ domain 77 180 IPR036869 -
Ahy15g2568 554 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 85 441 - -
Ahy15g2568 554 ProSiteProfiles Zinc finger CR-type profile. 214 296 IPR001305 GO:0031072|GO:0051082
Ahy15g2568 554 PANTHER EXPRESSED PROTEIN 85 441 - -
Ahy15g2568 554 ProSiteProfiles dnaJ domain profile. 80 142 IPR001623 -
Ahy15g2568 554 Pfam DnaJ central domain 227 291 IPR001305 GO:0031072|GO:0051082
Ahy15g2568 554 Pfam DnaJ domain 80 139 IPR001623 -
Ahy15g2568 554 CDD DnaJ_C 199 421 - -
Ahy15g2568 554 CDD DnaJ_zf 227 291 IPR001305 GO:0031072|GO:0051082
Ahy15g2568 554 PRINTS DnaJ domain signature 134 153 IPR001623 -
Ahy15g2568 554 PRINTS DnaJ domain signature 114 134 IPR001623 -
Ahy15g2568 554 PRINTS DnaJ domain signature 82 100 IPR001623 -
Ahy15g2568 554 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 214 294 IPR036410 -
Ahy15g2568 554 Hamap Chaperone protein DnaJ [dnaJ]. 77 458 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2568 Ahy-Chr15 140683866 140689407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2568 81 139 C2H2 Transcription Factor Family AT1G74250 41.791 4.49e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2568 K03686 - gmx:100782135 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2568 15 140683866 140689407 Ahy5g2626 5 102620923 102626118 hybridization