Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2561 ATGTGTTTGAGATCATTCAGGTGCAGTTTTTGCTGCATCTTCGTCACACTCTACACCTTATTCCTGTGCTTCATTCTATCTATATTCCTATTTTGGATAATCATATCTCCATCAAGTGTCAAATTCCAAGTAACCAATGCTTCCCTCACTCAATTCAATCTCACCAACAACAACACCACATTGAACTACAAATTCAAAGTCAACATCACAGCAAGAAACCCTAACAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATACGCGTGGTACAAAGACAGGAATTTCGCTGCCGTCAACTTGGCGCCATTTGATCAAGGTCACAAGAACACGACCCTCCTTCAAGAAGCCGTGTTCGAAGGACAAAACTCGATTCGACTCGGCTCAAAGCAAATCGCTGAGTACAACATGGAGAGGAGTGTGGGCATTTTCAATGACTTGGCCGTCGATTTGGATGTTAGAATAAGGGCTAAGTTTGGGAGGTTCAAGAGCAGCCGATTCAATCCACCGGTTGTTCAGTGTCGCCGGCTCAGGGTTCCTTTGATTTCGAATGGTAAACCGCCGGCAGCAACTTTTAGTGTTACAAGGTGCAGAAGTAGTAATTTCTTTCAAGATCGTGATGCCGAAGCCGGATAA 636 0.4465 MCLRSFRCSFCCIFVTLYTLFLCFILSIFLFWIIISPSSVKFQVTNASLTQFNLTNNNTTLNYKFKVNITARNPNNNVVVYYRRITAYAWYKDRNFAAVNLAPFDQGHKNTTLLQEAVFEGQNSIRLGSKQIAEYNMERSVGIFNDLAVDLDVRIRAKFGRFKSSRFNPPVVQCRRLRVPLISNGKPPAATFSVTRCRSSNFFQDRDAEAG* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2561 211 Pfam Late embryogenesis abundant protein 68 167 IPR004864 -
Ahy15g2561 211 PANTHER OS05G0367900 PROTEIN 19 202 IPR044839 GO:0098542
Ahy15g2561 211 PANTHER HARPIN-INDUCED 1 19 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2561 Ahy-Chr15 140583014 140584441 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2561 34 181 SNARE and Associated Proteins AT1G32270 31.757 2.91e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2561 - - gmx:100784278 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2561 15 140583014 140584441 Ahy5g2631 5 102732844 102733896 hybridization