Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2540 ATGTGTTTGAGATCATTCAGGTGCAGTTTTTGCTGCATCTTCGTCACACTCTACACCCTATTCCTGTGCTTCATTCTATCTATATTCCTATTTTGGATAATCATATCTCCATCAATTGTCAAATTCCAAGTAACCAATGCTTCCCTCACTCAATTCAATCTCACCAACAACAACACCACATTGAACTACAAATTCAAAGTCAACATCACAGCAAGAAACCCTAACAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATACGCGTGGTACAAAGACAGGAATTTCGCTGCCGTAAACTTGGCGCCATTTGATCAAGGTCACAAGAACACGACCCTCCTTCAAGAAGCCGTGTTCGAAGGACAAAACTCGATTCGACTCGGCTCAAAGCAAATCGCTGAGTACAACATGGAGAGGAGTGTGGGCATTTTCAATGACTTGGCCGTCGATTTGGATGTTAGAATAAGGGCTAAGTTTGGGAGGTTCAAGAGCAGCCGATTCAATCCACCGGTTGTTCAGTGTCGCCGGCTCAGGGTTCCTTTGATTTCGAATGGTAAACCGCCGGCAGCAACTTTTAGTGTTACAAGGTGCAGAAGTAGTAATTTCTTTCAAGATCGTGATGCCGAAGCCGGATAA 636 0.445 MCLRSFRCSFCCIFVTLYTLFLCFILSIFLFWIIISPSIVKFQVTNASLTQFNLTNNNTTLNYKFKVNITARNPNNNVVVYYRRITAYAWYKDRNFAAVNLAPFDQGHKNTTLLQEAVFEGQNSIRLGSKQIAEYNMERSVGIFNDLAVDLDVRIRAKFGRFKSSRFNPPVVQCRRLRVPLISNGKPPAATFSVTRCRSSNFFQDRDAEAG* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2540 211 Pfam Late embryogenesis abundant protein 68 167 IPR004864 -
Ahy15g2540 211 PANTHER OS05G0367900 PROTEIN 19 202 IPR044839 GO:0098542
Ahy15g2540 211 PANTHER HARPIN-INDUCED 1 19 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2540 Ahy-Chr15 140053670 140054703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2540 40 181 SNARE and Associated Proteins AT1G32270 33.099 7.04e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2540 - - gmx:100784278 259.61