Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2500 ATGGATTCAAAGACGCCGCAACGGCGTCGTCGAAGCAGTGTCATCCAAAATGGCACCATTACCAGAGAGAAGAAGCCCAAACGTAGCGAGGTCCTCGCAAAGAAGAAAGCCGTTGAGCAATCCATCAAATCAGCACGTGCCGAAAAGGATCACCTTGCTTCCTTCCCTGAGTTCCGCCACTTTGTCAATAACGGTCTATCTATGTGTTTGAAGTCAGGATGCGGTGATACACTATCCTCTCCTGTTAAGCACTATGTTCAGAGCCTCCTTAAGCTAAATATGGAAGGACCCTATGGATCTGAGTGGTTGGATGAAGAAAAGGTGAAGCGCAGAGAAATGGTTGCTCCAGAAGCACACTATATATTTGTGCACGAGGATGCCAATTCAGTTGGTGATGAGACAAGAATGATGTTGAGTGCAGAAGAGGCTTCAACTAGTTGTGTGGAAGATAGTGGCCCCTTAGTTGGATTTCTACATTACCGTTTTGTTCTGGAAGAAGATGTACCGGTCCTTTATGTGTATGAGTTGCAGATTGAGCCTCGTGTCCAAGGAAAAGGGTTAGGGAAGTTTCTAATGCAACTAATTGAGCTTATTGCCCAAAAGAAGTGCATGGGTGCTGTCATGCTAACTGTTCAAAAAGCAAATTTACTAGCTCTGAATTTCTATCTAAGTAAGCTGAGATACATCATATCAACCATTTCGCCTTCAAAGATGGGGATTGAGAAGAGTTACGAAATTCTTTGCAAAACATTTAATGACGAAGCGAAAACTATTTTGGAGACGATGGAAAACAGAGGCTTTTGA 804 0.4341 MDSKTPQRRRRSSVIQNGTITREKKPKRSEVLAKKKAVEQSIKSARAEKDHLASFPEFRHFVNNGLSMCLKSGCGDTLSSPVKHYVQSLLKLNMEGPYGSEWLDEEKVKRREMVAPEAHYIFVHEDANSVGDETRMMLSAEEASTSCVEDSGPLVGFLHYRFVLEEDVPVLYVYELQIEPRVQGKGLGKFLMQLIELIAQKKCMGAVMLTVQKANLLALNFYLSKLRYIISTISPSKMGIEKSYEILCKTFNDEAKTILETMENRGF* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2500 267 MobiDBLite consensus disorder prediction 1 35 - -
Ahy15g2500 267 Pfam Acetyltransferase (GNAT) family 139 222 IPR000182 GO:0016407
Ahy15g2500 267 Gene3D - 62 254 - -
Ahy15g2500 267 MobiDBLite consensus disorder prediction 21 35 - -
Ahy15g2500 267 PANTHER - 22 257 IPR039949 GO:0010485|GO:0043998
Ahy15g2500 267 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 137 224 IPR016181 -
Ahy15g2500 267 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 259 IPR000182 GO:0016407
Ahy15g2500 267 Coils Coil 28 48 - -
Ahy15g2500 267 CDD NAT_SF 148 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2500 Ahy-Chr15 138244964 138249511 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ahy15g2500 Acetyltransf_1 1.20E-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2500 K20794 - gmx:100500318 341.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2500 15 138244964 138249511 Ahy5g2666 5 103644760 103649311 hybridization