Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2462 ATGGCTAGTCTTAAAAATGATGAGCTGCCAATGCTGTCGAGAAAGGAATCAAAGGATGAAGAACAATATGATGAGACCCTGAATTCCAAATTGCAGAGATTCTTATCCAGGACACAAAGTTCAATTGCAATTCCTATGAGCACCCTGGAGTCATATGATAGCGAAACTAGTCTTGTTGGACACACTGGTCCACTGAAGAGTGAGAGAAAAACCCCCTTTCCACAAATGAGCGGTCCACTATATGCTGCCGGAACTGGAAGTCATTTACAGCAGAGGATGGTTGGTACAGGAAGAAAAGAAGATGAAAGAAAGACAGAAAAATTTGATGCTTTCCGTGGCACCGGTTCGAATAACTGGCATAATAACCATGATAAGGAAAATCAACACTTAATGAGGTCTGGACAACTTGGAATGTGTAATGATCCTTATTGCACTACTTGCCCGACATACTTCAAGTCTTCTCAACATAAAAATTCAAAATCTTCGACAATATTTGATCCCAAGTTCCACAATGCTCTCTATGGGGACGCCAAGGGATTTGCAACAAAGTTTTATTCCCTTTGTCGTTCGTACATTCCTGGAGTTATAAATCCTCACACTAAAGTCATACAACAATGGAACAAGATTTTGGCCATTTTTTGCTTGGTTGCTATTTTTGTGGATCCATTATTTTTCTTTGTATTTTATGCACGAGAGGATCATAATTGTGTTGTTATCGACTGGTCAATGACAACAACACTTGTTATTGTTCGAAGCTTGAATGATTTGGTATATTTCTTTAACATTCTTCTCCAGATAATGATATTGTTTGTCTTGCCAAAATCCCTTGGGGGAGCAAATTATGCTAAGAATCTTCTGCGTGCAGCGATCCTTGTGCAGTACATCCCCAGATTGTTTAGATTTCTGCCTATGCTAATTGGCCAGTCTCCATCAGGATTTATATTTGAGTCAGCCTGGGCAAATTTTATAATAAACCTTCTAATTTTTATGCTATCTGGACATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTGCAGAGGGTTAACCAATGTTTGCGAGATGCCTGCCACAATTCTAAGATCCCCGGATGCATGGTATTCATTGATTGTGGGCATGGTCATGATGGAATCTTTCAGCTTGACCAAACATCAAATCAGTGGAACAACAATACTGATGCTGTTGCTTGCTTGAATCCCCCATCTAATGGTGGTTTTTCTTATGGGATATATCAAAATGTTGTACCTCTTACTACAGAAACTAATGTGATCAACAAATACATCTATTCTTTGTTTTGGGGATTCCAGCAAATCAGTACTTTGGCTGGTAATCTAGTCCCTAGCACTTTTGTGTGGGAAGTCCTTTTCACTATGGCCATTATAGGATCTGGACTCTTGCTTTTTGCTATTCTCATTGGTAACATACAGAATTTTCTTCAAGCTCTTGGGCGGAGGAGGCTAGAAATGCAACTCAGGGGACGTGACGTGGAGCAATGGATGAGCCATCGACGCTTACCAGAAAATCTAAGAAGGAGAGTACGACAGGCTGAACGTTATTCTTGGGCTGCAACAAGGGGAGTTAACGAAGAAATGCTTATGGAAAATTTACCAGAAGATCTACAGAGAGACATAAGGCGTCATCTCTTCAAATTTATTAAGAAAGTTCGAATTTTTGCTTTGATGGATGAACCTATCCTAGATGCCATTTGTGAGAGATTAAGACAAAGGACATACATAAAAGGAAGTATTATATTGAGTATGGGTTGTCTGGTAGATAAGATGGTATTCGTGGTGCGAGGAAAGCTCGAGAGTGTCGGAGAAGATGGAATAAGACTTCCGTTATCCGAAGGGGATGCCTGTGGCGAAGAACTTCTAACATGGTATTTAGAACATTCTTCTGTCAGCACAGATGGTAGAAAAGTAAGGCTTCCTGGACAAAGGTTGCTTAGCAACAGAACAGTGAGGTGCTTAACAAATGTAGAGTCATTTTCGCTCCGCGCCGCAGATCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGGAGTCCGCGTGTTCAAGGAGCCCTAAGGTATGAATCACCTTATTGGAGATCCTTAGCTGCAATTCGTATTCAAGTTGCATGGAGATACAGGAAGAAACGTCTAAGTCGTGCTGATTCTGCTGTTTAA 2169 0.4071 MASLKNDELPMLSRKESKDEEQYDETLNSKLQRFLSRTQSSIAIPMSTLESYDSETSLVGHTGPLKSERKTPFPQMSGPLYAAGTGSHLQQRMVGTGRKEDERKTEKFDAFRGTGSNNWHNNHDKENQHLMRSGQLGMCNDPYCTTCPTYFKSSQHKNSKSSTIFDPKFHNALYGDAKGFATKFYSLCRSYIPGVINPHTKVIQQWNKILAIFCLVAIFVDPLFFFVFYAREDHNCVVIDWSMTTTLVIVRSLNDLVYFFNILLQIMILFVLPKSLGGANYAKNLLRAAILVQYIPRLFRFLPMLIGQSPSGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHNSKIPGCMVFIDCGHGHDGIFQLDQTSNQWNNNTDAVACLNPPSNGGFSYGIYQNVVPLTTETNVINKYIYSLFWGFQQISTLAGNLVPSTFVWEVLFTMAIIGSGLLLFAILIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPENLRRRVRQAERYSWAATRGVNEEMLMENLPEDLQRDIRRHLFKFIKKVRIFALMDEPILDAICERLRQRTYIKGSIILSMGCLVDKMVFVVRGKLESVGEDGIRLPLSEGDACGEELLTWYLEHSSVSTDGRKVRLPGQRLLSNRTVRCLTNVESFSLRAADLEEVTILFTRFLRSPRVQGALRYESPYWRSLAAIRIQVAWRYRKKRLSRADSAV* 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2462 722 MobiDBLite consensus disorder prediction 1 25 - -
Ahy15g2462 722 Pfam Ion transport protein 208 484 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Ahy15g2462 722 Gene3D Jelly Rolls 554 678 IPR014710 -
Ahy15g2462 722 ProSiteProfiles cAMP/cGMP binding motif profile. 556 624 IPR000595 -
Ahy15g2462 722 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 264 721 - -
Ahy15g2462 722 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 265 - -
Ahy15g2462 722 MobiDBLite consensus disorder prediction 9 25 - -
Ahy15g2462 722 Gene3D - 183 481 - -
Ahy15g2462 722 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 264 721 - -
Ahy15g2462 722 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 265 - -
Ahy15g2462 722 Gene3D Helix hairpin bin 483 548 - -
Ahy15g2462 722 SUPERFAMILY cAMP-binding domain-like 484 673 IPR018490 -
Ahy15g2462 722 SUPERFAMILY Voltage-gated potassium channels 198 484 - -
Ahy15g2462 722 CDD CAP_ED 556 672 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2462 Ahy-Chr15 137198649 137206214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2462 5 634 Ion Channels AT3G17700 53.666 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2462 K05391 - gmx:100795427 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2462 15 137198649 137206214 Ahy5g2693 5 104265710 104276434 hybridization