LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy15g2458	ATGGCTAGCTTTGAGAAAGATGAGGAGCCAATGCTGTTAGAAACACGTGGGCCGCGATCTGATGAACATGTGGATTCTAATTTCCGGAGGCTTGTGACAAGGACACGAAGTGCATCAATGTCGATTCCCATGGTCTCCATGGAATCATCCGACAGAGAAGCTACTTTTGTGGGGCATACTGGTCCACTACGTACTGTGAGAAAAACCCCTTTTCCTCAAATGAGTGGTCCACTCTATCCCACCCAAGGAACTGGAAATCCTTTACAGCGTAGCAGAGTTGTGGCAGGAAACAATGTAGGGGAGAGCAGGACAGAAAGGTTCCGCAACACAGGTGAAAGTCATTGGAATAACAACAATGATAGGAAGAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGTAACGATCCTTATTGTACTACTTGCCCTGCTAACTTTAAGGCTGCCCAACAAGGAAATTCAAGAACTTTGTATAGACGTGATCCCGTGGATTTGAAATGTATTGTTATCAACTGGCCAATGACAGCTACACTTGTTTTGTTTAGAAGCTTGAATGATGCCATATATTTCTTGAACATTCTTCTTCAGTTTAGGTTGGCTTATGTTTCTCCCGAGTCAACAGTGGTTGGTGCCGGAGATTTAGTTGACCATCCGAAGAAAATTGCTTTACATTACCTATGGGGCTATTTTTTGCTTGATTTATTTATTGTGATTCCCCTTCCTCAGATAATGCTTTATTTCATTATACCAACCTACTTGGGTTTCTCAGGGGCAAATTATGCTAAGAATCTTCTGCGTGCAGCTATCCTTGCGCAATACATGCCTAGACTATTCAGGTTTCTGCCTTTGCTAATTGGCCAGTCTCCAACAGGGTTCATATTTGAGTCGGCATGGGGGAATTTTATTATAAATCTTCTTATTTTTATGCTATCGGGACATGTTGTTGGCTCTTGCTGGTACCTCTTTGGCCTACAAAGGGTTAATCAATGTTTTCGAAACGCCTGCTCTAATTCTACTCTTCCTGGATGCAAGAATTACATTGATTGTGGCCTGTCTACCGACACACCAATTGAGTGGCATAATAATGAAAATGCCACTAATTGTTTGAACTCCAGTTCTGGTGTTTTTGAATATGGGATTTATGCCAATGCTGTAAGACTTACCACAGAAACTAATGTGGTCAAGAAATATGTGTATGCTCTGTTTTGGGGTTTCCAGCAAATAAGTACTCTTGCTGGTAATCAAACCCCAAGCTATTTTGTGTGGGAAGTCCTGTTCACAATGGCCATCATAGGGCTAGGACTCTTGCTTTTCGCACTTCTTATTGGAAACATACAAAATTTTCTTCAAGGCCTTGGGCGAAGGAGATTGGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCATCGTCGCTTACCAGAAGGTCTAAGAAGGAGAGTAAGACAAGCTGAACGATATAATTGGGCTGCAACAAGAGGGGTAAATGAAGAAATTCTTCTAGAGAATATGCCAGAAGATCTCCAAAGAGACGTAAGACGCCATCTGTTCAAATTTATCACGAAAGTTCGAATTTTCGCCTTGATGGATGAGCCCATCTTGGATGCCATTTGTGAGAGGCTTAGACAAAAGATATACATAAAAGGAAGTAATATCTTGTATCAAGGTGGTCTAGTGGAGAAGATGGTCTTTGTTGTGCGTGGGAAATTGGAGAGCATTGGAGAAGATGGAACTAAAATTAACTTAACCGAAGGGGATGCTTGTGGTGAAGAACTCTTGAGATGGTATCTAGAGAATTCATCAGTTAGCACAGATGGTAGAAAAGTAAGGCTACCTGGACAAAGGTTGCCGAGCAGCAGGACAGTAACGTGCATAACAAACGTGGAGGCATTTTCACTCCGAGCTGCTGACCTTGAAGAAGTAACGATCATTTTCACTAGATTCTTGCGGAGTCCACGTGTTCAAGGAGCTCTAAGATACGAGTCGCCTTATTGGAGATCCCTTGCAGCAAGCCGAATTCAGGTTGCATGGAGATACAGGAAGAAACGACTAAACCGTGCCGCGTCACAACTAGATTAG	2088	0.4267	MASFEKDEEPMLLETRGPRSDEHVDSNFRRLVTRTRSASMSIPMVSMESSDREATFVGHTGPLRTVRKTPFPQMSGPLYPTQGTGNPLQRSRVVAGNNVGESRTERFRNTGESHWNNNNDRKNEHLLRSGQLGMCNDPYCTTCPANFKAAQQGNSRTLYRRDPVDLKCIVINWPMTATLVLFRSLNDAIYFLNILLQFRLAYVSPESTVVGAGDLVDHPKKIALHYLWGYFLLDLFIVIPLPQIMLYFIIPTYLGFSGANYAKNLLRAAILAQYMPRLFRFLPLLIGQSPTGFIFESAWGNFIINLLIFMLSGHVVGSCWYLFGLQRVNQCFRNACSNSTLPGCKNYIDCGLSTDTPIEWHNNENATNCLNSSSGVFEYGIYANAVRLTTETNVVKKYVYALFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQGLGRRRLEMQLRGRDVEQWMSHRRLPEGLRRRVRQAERYNWAATRGVNEEILLENMPEDLQRDVRRHLFKFITKVRIFALMDEPILDAICERLRQKIYIKGSNILYQGGLVEKMVFVVRGKLESIGEDGTKINLTEGDACGEELLRWYLENSSVSTDGRKVRLPGQRLPSSRTVTCITNVEAFSLRAADLEEVTIIFTRFLRSPRVQGALRYESPYWRSLAASRIQVAWRYRKKRLNRAASQLD*	696

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy15g2458	695	Gene3D	Jelly Rolls	526	650	IPR014710	-
	Ahy15g2458	695	SUPERFAMILY	cAMP-binding domain-like	456	645	IPR018490	-
	Ahy15g2458	695	SMART	cnmp_10	528	663	IPR000595	-
	Ahy15g2458	695	MobiDBLite	consensus disorder prediction	1	23	-	-
	Ahy15g2458	695	SUPERFAMILY	Voltage-gated potassium channels	171	456	-	-
	Ahy15g2458	695	Gene3D	Helix hairpin bin	455	520	-	-
	Ahy15g2458	695	Pfam	Ion transport protein	177	455	IPR005821	GO:0005216\|GO:0006811\|GO:0016020\|GO:0055085
	Ahy15g2458	695	ProSiteProfiles	cAMP/cGMP binding motif profile.	528	596	IPR000595	-
	Ahy15g2458	695	MobiDBLite	consensus disorder prediction	62	90	-	-
	Ahy15g2458	695	MobiDBLite	consensus disorder prediction	75	90	-	-
	Ahy15g2458	695	PANTHER	NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED	4	136	-	-
	Ahy15g2458	695	PANTHER	NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED	165	692	-	-
	Ahy15g2458	695	CDD	CAP_ED	528	644	IPR000595	-
	Ahy15g2458	695	Gene3D	-	167	452	-	-
	Ahy15g2458	695	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	165	692	-	-
	Ahy15g2458	695	PANTHER	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	4	136	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy15g2458	Ahy-Chr15	137126463	137138254	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy15g2458	167	606	Ion Channels	AT3G17700	69.977	0.0	619

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy15g2458	K05391		-	gmx:100795427	1006.9