Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2456 ATGAAATTGCCGCAAGGAAGCGCAGATGGAACTGCCGCTAGTCTGAAGGAAGCACAGACGGAACTGCACGTGATGGTATACGGTGTCCCGGAAAATGAGGTAGTGTCTACCATTCTTGGACGTGTTAATCCCTTGCTGTTTACAATGCTGATGGTGCAGCATGCAATTCAAATAGTGAGGTATTTTCCCAACCAATTGTTTGGCACGCATGAGACCATTCGGAGTGTTTTTGCGACGAATGTTGTTGTCCTTGTACTAATTGGACATCTTGTTGGTTGTTTCGGATATCTTGCTGCTGTAGAGAAAGTTGAGAAATGTTTGCGAACTACCTGCAGCGCTTCTGGCTTAACTGGATGTAAGAGTCTCATTGTTTGTGAAGCTAAGAAAAACAATGATGAAGATCAGTGGTTGATAAATACAGCTGCCAGCAACTGTTTCAATTCTTCCTCTAATACTTCTGGCAATGGGATCTTTGCTGATCTAATGCCACTTGTGGAATATGATCCGGTCCAAAAATATGCATTTGCTCTGTTCTGGGGTATCACGCAAATTAGTTTCATTTCTGTTAAAACTCCAAGCTTCTCTAGCGTGAAAGAAGTCATTTTCCTATGGATTATCAGAGCATTGGGGCTCTCAATTTTTGCAATCATATTTGGAAACATAACAAGTATTATTCAAGGTTTCAGTCGGAGGAAGATAGATAACATACTTAGACGCAATGAAATTGAACGATGGTCAAGGCATCGTCACCTACCAGAAGATTTAAGCAGGAGAATACTAGATGCTGAAATTCAGAATTGGACTGCAACAAAAGGGATGAAGGAAGAAGAACTTTTGAAGAGTATGCCAAAGGATATCCAGAGAGACCTAACAAGGCATCAGTTTCTCCCCATTATTAAAAAGGTTCAACTCTTTGAAATCATGCACCAGTCAATTCTTGATGCTATCTGTATGCAATCAAAGTGGAAGCTGTACTTGGCAGACAGTACAATCATGTATCCAGGTGACTTAATAGAGATGATAGTCTTTGTTGTGCATGGAACACTGGAGATCAAGGACACCAGTGGAACAAGCGTCCACATATCTGACGGGGATGCATGTTGCCAAGAACTCCTTTTCTGGTGTCTTCAGAGAGCTTCATCCAATAGTAGCACAGATGGTGACAAATTATTTTTTCCTGAAGAAAGATTTCTGAGCACCAAGAGTATAACTTGTTTAACAGATGTGGAGGCATTTGTGGTTGAAGTTACTGACCTTGAAAAGATCCTAACTCGGTTTGCAAAATTCTTGCACACTCCACTTATTGAAGAGGCCATAAAAAGCTATTTGAAGGCTGGGGAACGTGCTTCAACTGAGTTTAGGTTGGCTTATATTTCTTTTGAGCCAACAACTGTTGGTGCTGGATATTTAGTTGACCATCCGAAAAAGATTGCTCGACATTACATGACAGGGTTTCGGTTTTGGGTTGATCTGTGTGTCCTGATTTCCATTCCTTTGATAATGTTCTATCGTGTCTCACCAGATGACTTCAATTTTCGGACGTCCTATTCCGTTGCTATTGGCTGGGTTGATTGTGCAGACTGTCATCAGAATATTCAGATTTGTTACAAGACACCTGAAAGATTGTTGGTGAATTTTAGCTAG 1644 0.41 MKLPQGSADGTAASLKEAQTELHVMVYGVPENEVVSTILGRVNPLLFTMLMVQHAIQIVRYFPNQLFGTHETIRSVFATNVVVLVLIGHLVGCFGYLAAVEKVEKCLRTTCSASGLTGCKSLIVCEAKKNNDEDQWLINTAASNCFNSSSNTSGNGIFADLMPLVEYDPVQKYAFALFWGITQISFISVKTPSFSSVKEVIFLWIIRALGLSIFAIIFGNITSIIQGFSRRKIDNILRRNEIERWSRHRHLPEDLSRRILDAEIQNWTATKGMKEEELLKSMPKDIQRDLTRHQFLPIIKKVQLFEIMHQSILDAICMQSKWKLYLADSTIMYPGDLIEMIVFVVHGTLEIKDTSGTSVHISDGDACCQELLFWCLQRASSNSSTDGDKLFFPEERFLSTKSITCLTDVEAFVVEVTDLEKILTRFAKFLHTPLIEEAIKSYLKAGERASTEFRLAYISFEPTTVGAGYLVDHPKKIARHYMTGFRFWVDLCVLISIPLIMFYRVSPDDFNFRTSYSVAIGWVDCADCHQNIQICYKTPERLLVNFS* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2456 547 CDD CAP_ED 304 431 IPR000595 -
Ahy15g2456 547 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 452 504 - -
Ahy15g2456 547 Gene3D Helix hairpin bin 237 293 - -
Ahy15g2456 547 SUPERFAMILY Voltage-gated potassium channels 47 232 - -
Ahy15g2456 547 SUPERFAMILY cAMP-binding domain-like 238 430 IPR018490 -
Ahy15g2456 547 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 45 440 - -
Ahy15g2456 547 Gene3D Jelly Rolls 302 428 IPR014710 -
Ahy15g2456 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 440 - -
Ahy15g2456 547 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 452 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2456 Ahy-Chr15 136995844 137012661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2456 452 507 Ion Channels AT3G17700 50.000 3.36e-10 60.8