Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2444 ATGGAGATGCAGGACCAAATCGAAGGCACAAAGCTAAGCAAGTCTGGTACAGCCAGTGACTTCCATTCCAATGATGGATCACAATCCCAATCGCCGGATATAAGTTCTGTTGGGAACAATCATGCCCCCAAGGTGAGGAAACCATATACCATCACTAAGCAAAGGGAGAAGTGGACTGAGGAAGAGCATGAAAAGTTCCTTGAAGCTTTGAAGTTGTATGGTCGGGGATGGCGTCAAATTGAAGAGCATATAGGCACCAAAACTGCTGTTCAGATTCGAAGCCATGCACAAAAGTTTTTCTCTAAGGTTGTGCGGGAATCGGACGGAAGTGCTGAAAGTTCTATACATCCGATTGACATACCTCCTCCTCGTCCTAAAAGGAAACCCCTTCATCCATATCCTCGTAAATTGGCCAACTCCTTCAAAAGGCACTCCAGACCAAATGAACCAGAAAAATCTCCATCGCCTAATCTGTCCTCTGCGGAGAAAGACTCTCAATCTCCAACCTCTGTGCTATCTGCCTTTGGTTCGGAAGCATTTGGGTCAGCATTTTCAGAGCATACCAACAGATGCCTTTCTCCGAATTCTTGCACTACTGACATTCAATCAATTAACTTGTCACCTATTGAGAAGGAAAATGATTGCATGACATCTAAACCATCCAAGGAGGAAGACAAAACGCCTCTAGCTTCTGCCGCTTTATCCATTAGCTCACAACCTTACTTGCACATGTCTGAGAAGTTGGAGTTGTGTTCCAAGCAAACCAAGTGTATCAACAACGATGTTGTCAATGTCCTGCCCACTACTATAAAGCTGTTTGGAAGAACCGTTTCAATGGTCGGTAATCAGGAGTCAATTAATACTGAAGAGGAGTGTGTTAAGCTATGTACTACTAGGTCTGATGAAGTAGATGATGTTGAGAATCAATTGAATACTCAGTTATCACTAGGCATGTGTAATGGAAGTTGGCGAGTAATGCCTAAAGAAGCTATAGTGACGGGCGCGGAGCATCCGAAGGAGGACCTTGGCCTTGGAGAATCTGCACCTGAAGCATCTTTGGCATGGTCAAGTTTGTTCCCAGGCGGTCCGGCTGCTTACTTTGGTTCATCCAATACAGTCGTAAATCCTATGCCTCTTCACCCCTCCTTAAAAGTAAGAGCTAGAGAGGAGGAAGGTTCTTGTACTGGTTCCAATGGTGAATCAGTCAATGATGTGGAAATTCAGGGCAAGATTCAGGGAAGGTCCTTGGACACCGTCGATTCCAGGTGTCAACAAACATCTCATCAAGAGGAAGTAGTAGTCCCCCAGAAGTCTCCAAGGGGTTTTGTACCATACAAAAGATGTTTAGCTGAAAGAGATGCAAGTTCTTTGATTGTTGCATTGGAAGAAAGGAAGGGGCAAAGAGCTAGGGTGTGCTCATAG 1422 0.4487 MEMQDQIEGTKLSKSGTASDFHSNDGSQSQSPDISSVGNNHAPKVRKPYTITKQREKWTEEEHEKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVVRESDGSAESSIHPIDIPPPRPKRKPLHPYPRKLANSFKRHSRPNEPEKSPSPNLSSAEKDSQSPTSVLSAFGSEAFGSAFSEHTNRCLSPNSCTTDIQSINLSPIEKENDCMTSKPSKEEDKTPLASAALSISSQPYLHMSEKLELCSKQTKCINNDVVNVLPTTIKLFGRTVSMVGNQESINTEEECVKLCTTRSDEVDDVENQLNTQLSLGMCNGSWRVMPKEAIVTGAEHPKEDLGLGESAPEASLAWSSLFPGGPAAYFGSSNTVVNPMPLHPSLKVRAREEEGSCTGSNGESVNDVEIQGKIQGRSLDTVDSRCQQTSHQEEVVVPQKSPRGFVPYKRCLAERDASSLIVALEERKGQRARVCS* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2444 473 CDD SANT 57 100 IPR001005 -
Ahy15g2444 473 PANTHER SWI/SNF COMPLEX-RELATED 3 461 - -
Ahy15g2444 473 MobiDBLite consensus disorder prediction 106 170 - -
Ahy15g2444 473 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 53 102 IPR006447 GO:0003677
Ahy15g2444 473 ProSiteProfiles SANT domain profile. 53 104 IPR017884 -
Ahy15g2444 473 Pfam Myb-like DNA-binding domain 55 98 IPR001005 -
Ahy15g2444 473 MobiDBLite consensus disorder prediction 151 170 - -
Ahy15g2444 473 MobiDBLite consensus disorder prediction 208 227 - -
Ahy15g2444 473 SUPERFAMILY Homeodomain-like 49 103 IPR009057 -
Ahy15g2444 473 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Ahy15g2444 473 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Ahy15g2444 473 Gene3D - 57 104 - -
Ahy15g2444 473 MobiDBLite consensus disorder prediction 8 38 - -
Ahy15g2444 473 PANTHER PROTEIN REVEILLE 7-RELATED 3 461 - -
Ahy15g2444 473 SMART sant 54 102 IPR001005 -
Ahy15g2444 473 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2444 Ahy-Chr15 136489140 136493242 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy15g2444 Myb_DNA-binding 1.50E-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2444 - - gmx:778089 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2444 15 136489140 136493242 Ahy5g2706 5 104842110 104846200 hybridization