Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2441 ATGAATACACTTTTGCAGAATACTAAGCTCTCTAACAATCAAATCAATACAAGAGAGAAAAATAATATAATGTCACCAGTTGGATTACCACCTGGGTTTAGGTTTCATCCAACAGATGAAGAGCTTGTTAACTATTATCTAAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAGGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAAAAATCATTTTTGCCGAGTAGAGATCCAGAGTGGTATTTCTTTGGACCAAGGGACAGAAAATACCCTAACGGATTTAGAACAAATAGAGCAACACGAGCAGGGTACTGGAAATCAACAGGTAAAGACAGGAGAGTTTCAAGCCAAAGCAGACCAATTGGTATGAAGAAGACTTTGGTTTATTATAGAGGAAGGGCTCCTCAAGGAATCAGAACTGATTGGGTTATGCACGAATATCGTCTCGATGACAAGGACTCTGAAGACACCACCGGTTTACAGGATACTTATGCTTTGTGCCGTGTGTTCAAGAAAAATGGAATATGTACGGATGTTGAAGAGCAAGTAGGGCATTGTAGTAACATGTCTTCACTAATTGAGAGCTCACAAACCATAATCAATAATAATAACAATAATAGTAATAATAATAATGAGTATTGTGAAACCATGTCACCAGACATAGCAGGGGTTTCATCTTCATGTTTGGAAGAGGAAGACAAAGATGATTCATGGATGCAGTTCATCACGGAAGATGCATGGTACTCTTCTAATGCACCAAATATGGTTGGTGGTGAAGAAGTTTCACATGTTACATTTACAAGCTAA 828 0.3792 MNTLLQNTKLSNNQINTREKNNIMSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVSSQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDSEDTTGLQDTYALCRVFKKNGICTDVEEQVGHCSNMSSLIESSQTIINNNNNNSNNNNEYCETMSPDIAGVSSSCLEEEDKDDSWMQFITEDAWYSSNAPNMVGGEEVSHVTFTS* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2441 275 SUPERFAMILY NAC domain 22 179 IPR036093 GO:0003677|GO:0006355
Ahy15g2441 275 Pfam No apical meristem (NAM) protein 30 156 IPR003441 GO:0003677|GO:0006355
Ahy15g2441 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 15 274 - -
Ahy15g2441 275 ProSiteProfiles NAC domain profile. 29 179 IPR003441 GO:0003677|GO:0006355
Ahy15g2441 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 15 274 - -
Ahy15g2441 275 Gene3D NAC domain 38 182 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2441 Ahy-Chr15 136448781 136454455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2441 24 268 NAC Transcription Factor Family AT3G17730 76.984 3.78e-134 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy15g2441 NAM 8.20E-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g2441 - - adu:107490712 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g2441 15 136448781 136454455 Ahy5g2709 5 104880779 104885808 hybridization