Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2440 ATGGAGGAGTTGGTGAGGCTTTACCGAGAATCCCATTTGGGGAAGAGACTTCCTGCTTATGATGGGCGAAAGAGCCTCTATACAGCTGGTCCACTGCCTTTCGTGTCAAAGGAGTTTAGGATCATGTTAATTGATGAAGATGATGGAACTGGAGCTCAAAGGAGGGAGAGGGAATTCAAAGTTGTGATAAAATTGGCTGCTCGGGCAGACCTTCACCATTTAGGGCTCTTTTTGCAAGGGAGACAAACTGATGCACCTCAGGAAGCATTGCAGGTCCTCGATATTGTGTTGCGTGAACTCCCTACTACCAGGTATTGTCCTGTAGGAAGATCATTTTATTCACCCGATCTTGGAAGAAGACAGCCTTTGGGTGAGGGGTTAGAAAGCTGGCGTGGTTTCTATCAGAGTATTCGTCCCACACAGATGGGACTTTCTCTGAACATTGATATGTCTTCCACTGCATTTATTGAGCCATTGCCGGTGATTGAGTTTGTAACTCAGCTACTGAATAGGGATGTATCCAGCCGACCACTGTCAGATGCTGATCGTGTGAAGATCAAAAAAGCTCTCCGTGGTATCAAGGTTGAAGTAACTCATCGTGGAAACATGAGAAGAAAATATCGCATCTCTGGTCTGACTTCCCAGGCTACTAGAGAGTTGACATTCCCTGTAGACGAGAGGGGAACAATGAAGTCTGTCGTTGAGTACTTCTCTGAGACCTACGGGTTTCACATTCAACATACTCAGTGGCCTTGTTTGCAAGTGGGAAATACACAGAGGCCAAATTATCTGCCAATGGAGGTTTGCAAGATTGTAGAAGGGCAGAGGTACTCAAAGAGGTTGAATGAAAGGCAGATTACTGCTTTGCTCAAAGTCACATGCCAACGACCTGTTGAAAGGGAGCGTGATATAATGCAGACAGTACATCACAATGCCTATGATCAAGACCCTTATGCTAAAGAGTTTGGAATCAAGATCAGTGAAAAGCTTGCTCAAGTTGAAGCTCGCATCCTTCCTCCACCCTGGCTCAAATATCATGATACAGGTAGAGAAAAGGACTGCCTACCTCAGGTTGGCCAGTGGAATATGATGAATAAGAAAATGGTTAATGGAGGAACAGTCAACCATTGGTTCTGCATTAACTTTTCCAGAAATGTTCAAGATAGTGTTGCCCGCACCTTTTGTTATGAGCTCGCTCAGATGTGTCAAGTATCTGGCATGGCATTCAATCTGGATCCAGTAGTTCCCCCAGTTAGTGCTCGTCCTGACCAAGTTGAGAAGGTTCTGAAAACTCGGTATTATGATGCCAAGAACAAGCTGCCTGGAAAGGATCTTGATTTGCTTATTGTTATCCTGCCTGACAATAATGGTTCTCTTTATGGTGACCTGAAACGAATATGTGAGACTGATCTTGGGCTTGTTTCCCAATGTTGTTTAACAAAGCATGTATACAAAATGAGCAAGCAGTATCTTGCAAATGTTGCTTTGAAAATTAATGTTAAGGTTGGTGGAAGGAACACTGTGCTTGTTGACGCCCTTTCACGGCGTATTCCCCTTGTCAGCGACAGGCCTACAATAATTTTTGGAGCTGATGTTACTCACCCACACCCTGGAGAGGATTCAAGCCCATCTATTGCAGCTGTTGTGGCTTCCCAAGATTGGCCTGAGATTACAAAGTATGCTGGTTTGGTTTGTGCACAAGCACATCGACAGGAACTCATTCAGGATCTCTTCAAGCAATGGCAAGATCCTAATAGAGGACAGGTCACGGGTGGAATGATTAAGGAACTACTTATATCTTTCCGGAGAGCAACTGGGCAGAAGCCACAGCGCATCATATTTTACAGGGATGGTGTGAGTGAGGGTCAATTTTATCAAGTCCTATTGTTTGAGCTTGATGCTATTAGAAAGGCCTGTGCATCTCTCGAGCCCAATTATCAGCCTCCTGTGACCTTTGTGGTAGTTCAAAAGCGCCATCACACTAGGCTTTTTGCCAGCAACCATCATGATCGAAACTCTATTGATCGGAGTGGGAATATACTGCCCGGTACTGTTGTGGACTCCAAAATCTGCCACCCAACTGAATTTGACTTTTATCTCTGTAGTCATGCTGGAATTCAGGGCACTAGTCGTCCAGCTCATTATCACGTTCTGTGGGATGAAAACAATTTCACAGCTGATGCTCTTCAGATGCTTACAAACAACCTGTGCTACACCTATGCCAGATGCACCCGTTCTGTTTCAATTGTGCCTCCTGCATATTATGCGCACTTGGCTGCATTCCGAGCCCGTTTTTACATGGAGCCCGAGACATCCGACAGTGGCTCCATGACAAGTGGTGCTGCTGCAGGTCGCGGTATGGGTGCAGGACGCAGTACGCGTGCACCTGGTGCCAGCGCTGCTGTGAGGCCCCTGCCATCCCTCAAGGACAATGTCAAGAGGGTCATGTTCTATTGCTGA 2460 0.4593 MEELVRLYRESHLGKRLPAYDGRKSLYTAGPLPFVSKEFRIMLIDEDDGTGAQRREREFKVVIKLAARADLHHLGLFLQGRQTDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVTQLLNRDVSSRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFSETYGFHIQHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYDQDPYAKEFGIKISEKLAQVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWFCINFSRNVQDSVARTFCYELAQMCQVSGMAFNLDPVVPPVSARPDQVEKVLKTRYYDAKNKLPGKDLDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVYKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVCAQAHRQELIQDLFKQWQDPNRGQVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFASNHHDRNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQMLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSGAAAGRGMGAGRSTRAPGASAAVRPLPSLKDNVKRVMFYC* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2440 819 Pfam PAZ domain 163 288 IPR003100 GO:0005515
Ahy15g2440 819 SUPERFAMILY PAZ domain 153 313 IPR036085 GO:0005515
Ahy15g2440 819 ProSiteProfiles PAZ domain profile. 159 273 IPR003100 GO:0005515
Ahy15g2440 819 Gene3D - 516 819 IPR036397 GO:0003676
Ahy15g2440 819 PANTHER PROTEIN ARGONAUTE 1A 1 818 - -
Ahy15g2440 819 Gene3D - 337 510 - -
Ahy15g2440 819 Pfam Argonaute linker 1 domain 107 157 IPR014811 -
Ahy15g2440 819 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 1 818 - -
Ahy15g2440 819 Pfam Mid domain of argonaute 356 431 IPR032473 -
Ahy15g2440 819 ProSiteProfiles Piwi domain profile. 447 768 IPR003165 GO:0003676
Ahy15g2440 819 CDD PAZ_argonaute_like 158 272 - -
Ahy15g2440 819 Pfam N-terminal domain of argonaute 2 97 IPR032474 -
Ahy15g2440 819 SMART DUF1785_2 106 158 IPR014811 -
Ahy15g2440 819 SMART PAZ_2_a_3 163 295 IPR003100 GO:0005515
Ahy15g2440 819 Gene3D paz domain 152 277 - -
Ahy15g2440 819 SUPERFAMILY Ribonuclease H-like 433 768 IPR012337 -
Ahy15g2440 819 Pfam Piwi domain 448 767 IPR003165 GO:0003676
Ahy15g2440 819 SMART Piwi_a_2 447 768 IPR003165 GO:0003676
Ahy15g2440 819 Pfam Argonaute linker 2 domain 299 345 IPR032472 -
Ahy15g2440 819 MobiDBLite consensus disorder prediction 776 801 - -
Ahy15g2440 819 CDD Piwi_ago-like 317 767 IPR045246 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2440 Ahy-Chr15 136193591 136199123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2440 1 819 Eukaryotic Initiation Factors Gene Family AT1G48410 86.010 0.0 1489